RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 KCTD1Q719H9 257 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 SPC25Q9HBM1 224 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 ATP8A2Q9NTI2 1148 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 DNM3Q9UQ16 869 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 KRT5P13647 590 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 MECOMQ03112 1051 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 KIF18AQ8NI77 898 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 LMAN1P49257 510 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 CCDC102AQ96A19 550 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 SWAP70Q9UH65 585 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 RAPGEF1Q13905 1077 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 SPATA31A1Q5TZJ5 1347 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 RPL13P26373 211 aaKnown RBP19.48■□□□□ 0.71
PTPN21-208ENST00000556564 R3HDM1Q15032 1099 aaKnown RBP19.48■□□□□ 0.71
PTPN21-208ENST00000556564 CDC37L1Q7L3B6 337 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 MYCT1Q8N699 235 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 METTL13Q8N6R0 699 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 KCNH3Q9ULD8 1083 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 GAS7O60861 476 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 OSBPP22059 807 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 DNM2P50570 870 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 ME3Q16798 604 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 PRR16Q569H4 304 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 COA1Q9GZY4 146 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 ZNF277Q9NRM2 450 aaPredicted RBP19.48■□□□□ 0.71
PTPN21-208ENST00000556564 ESPNB1AK53 854 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 NEMFO60524 1076 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 MIER3Q7Z3K6 550 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 KIF2AO00139 706 aaPredicted RBP19.48■□□□□ 0.71
PTPN21-208ENST00000556564 ADD2P35612 726 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 UVSSAQ2YD98 709 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 GNPTABQ3T906 1256 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 ATL3Q6DD88 541 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 CABP7Q86V35 215 aa19.48■□□□□ 0.71
PTPN21-208ENST00000556564 EIF3JO75822 258 aaKnown RBP19.47■□□□□ 0.71
PTPN21-208ENST00000556564 EEF2P13639 858 aaKnown RBP19.47■□□□□ 0.71
PTPN21-208ENST00000556564 TRPC6Q9Y210 931 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 ADCY9O60503 1353 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 IFI16Q16666 785 aaKnown RBP19.47■□□□□ 0.71
PTPN21-208ENST00000556564 HOOK3Q86VS8 718 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 TRMT2AQ8IZ69 625 aaKnown RBP19.47■□□□□ 0.71
PTPN21-208ENST00000556564 H7C1W4 665 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 TBC1D10BQ4KMP7 808 aaPredicted RBP19.47■□□□□ 0.71
PTPN21-208ENST00000556564 ZSCAN30Q86W11 494 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 FANCBQ8NB91 859 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 FAM200AQ8TCP9 573 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 ECE2O60344 883 aa19.47■□□□□ 0.71
PTPN21-208ENST00000556564 USP17L8P0C7I0 530 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 CYLC1P35663 651 aaPredicted RBP19.46■□□□□ 0.71
PTPN21-208ENST00000556564 ZMYM1Q5SVZ6 1142 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 ZMYM6O95789 1325 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 ADRA2BP18089 450 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 POLA2Q14181 598 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 CNNM4Q6P4Q7 775 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 UTP14CQ5TAP6 766 aaKnown RBP19.46■□□□□ 0.71
PTPN21-208ENST00000556564 RNF181Q9P0P0 153 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 STK24Q9Y6E0 443 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 WDR44Q5JSH3 913 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 CALUO43852 315 aaPredicted RBP19.46■□□□□ 0.71
PTPN21-208ENST00000556564 MCF2L2Q86YR7 1114 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 DYNLL2Q96FJ2 89 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 FERMT1Q9BQL6 677 aa19.46■□□□□ 0.71
PTPN21-208ENST00000556564 SPOUT1Q5T280 376 aaKnown RBP19.45■□□□□ 0.7
PTPN21-208ENST00000556564 DPP9Q86TI2 863 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 EXOC7Q9UPT5 735 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 NRKQ7Z2Y5 1582 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 CDAN1Q8IWY9 1227 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 RASGRF1Q13972 1273 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 ZRSR2Q15696 482 aaKnown RBP19.45■□□□□ 0.7
PTPN21-208ENST00000556564 PIH1D3Q9NQM4 214 aaKnown RBP19.45■□□□□ 0.7
PTPN21-208ENST00000556564 BCORL1Q5H9F3 1711 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 ADD1P35611 737 aaKnown RBP19.45■□□□□ 0.7
PTPN21-208ENST00000556564 CACNB3P54284 484 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 PUS7LQ9H0K6 701 aaKnown RBP19.45■□□□□ 0.7
PTPN21-208ENST00000556564 CUTAO60888 179 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 FAM160A1Q05DH4 1040 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 BLIDQ8IZY5 108 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 PSMD1Q99460 953 aa19.45■□□□□ 0.7
PTPN21-208ENST00000556564 DDAH1O94760 285 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 TTLL1O95922 423 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 SNW1Q13573 536 aaKnown RBP19.44■□□□□ 0.7
PTPN21-208ENST00000556564 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
PTPN21-208ENST00000556564 GTF3C6Q969F1 213 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 ZNF830Q96NB3 372 aaPredicted RBP19.44■□□□□ 0.7
PTPN21-208ENST00000556564 AGLP35573 1532 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 GCNT3O95395 438 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 UBXN2AP68543 259 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 CYP2D7A0A087X1C5 515 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 SLC16A2P36021 539 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 GTPBP4Q9BZE4 634 aaKnown RBP19.44■□□□□ 0.7
PTPN21-208ENST00000556564 PREX1Q8TCU6 1659 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 CHRNA5P30532 468 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 TRPC3Q13507 836 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 CELF1Q92879 486 aaKnown RBP19.44■□□□□ 0.7
PTPN21-208ENST00000556564 CEP83Q9Y592 693 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
PTPN21-208ENST00000556564 IREB2P48200 963 aaKnown RBP19.43■□□□□ 0.7
PTPN21-208ENST00000556564 HLTFQ14527 1009 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTPN21-208ENST00000556564 FAM102BQ5T8I3 360 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms