RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	GUCY1B3	Q02153	619 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SLC4A8	Q2Y0W8	1093 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CHADL	Q6NUI6	762 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CPLX2	Q6PUV4	134 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	DGKH	Q86XP1	1220 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SLC44A5	Q8NCS7	719 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TEKT1	Q969V4	418 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	C8orf76	Q96K31	380 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ALG1	Q9BT22	464 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	VPS33B	Q9H267	617 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	USP40	Q9NVE5	1235 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TFIP11	Q9UBB9	837 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SCN9A	Q15858	1988 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TSPY2	A6NKD2	308 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PPIP5K2	O43314	1243 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	DDAH1	O94760	285 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	GUCY1A2	P33402	732 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CTCF	P49711	727 aa	Predicted RBP	11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SSRP1	Q08945	709 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CSPP1	Q1MSJ5	1256 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CAVIN1	Q6NZI2	390 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	GAS2L3	Q86XJ1	694 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	AMOTL1	Q8IY63	956 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	LEO1	Q8WVC0	666 aa	Predicted RBP	11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	RCOR1	Q9UKL0	485 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PCDHAC2	Q9Y5I4	1007 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	COL4A5	P29400	1685 aa		11.02	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FOCAD	Q5VW36	1801 aa		11.02	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CNTNAP1	P78357	1384 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CCDC196	A0A1B0GTZ2	297 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	KIF28P	B7ZC32	967 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CALM1	P0DP23	149 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CALM2	P0DP24	149 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CALM3	P0DP25	149 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	KIF23	Q02241	960 aa	Predicted RBP	11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ZSCAN23	Q3MJ62	389 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	KRT40	Q6A162	431 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ATL3	Q6DD88	541 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CATIP	Q7Z7H3	387 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	KIAA0825	Q8IV33	1275 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	NEDD1	Q8NHV4	660 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	NUP133	Q8WUM0	1156 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	GML	Q99445	158 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	MAP3K14	Q99558	947 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	SLC26A6	Q9BXS9	759 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	MKNK2	Q9HBH9	465 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	RBM28	Q9NW13	759 aa	Known RBP	11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	PCDH10	Q9P2E7	1040 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	SERPINA10	Q9UK55	444 aa		11.02	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ADAMTSL1	Q8N6G6	1762 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	NFKBIE	O00221	500 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	PRPF3	O43395	683 aa	Known RBP	11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	VIL1	P09327	827 aa	Known RBP	11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	NCL	P19338	710 aa	Known RBP	11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	PKN1	Q16512	942 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CCDC178	Q5BJE1	867 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	TMTC3	Q6ZXV5	915 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CMTR1	Q8N1G2	835 aa	Known RBP	11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	SHISA4	Q96DD7	197 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	PGBD1	Q96JS3	809 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	IDI2	Q9BXS1	227 aa		11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	RNF26	Q9BY78	433 aa	Predicted RBP	11.01	□□□□□ -0.65
HNRNPC-223	ENST00000556142	IGKV6D-41	A0A0C4DH26	115 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	PLEKHA8P1	O95397	391 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	DEXI	O95424	95 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	NFIA	Q12857	509 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ZFPM1	Q8IX07	1006 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	SRBD1	Q8N5C6	995 aa	Known RBP	11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	USP28	Q96RU2	1077 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ZNF287	Q9HBT7	754 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	FAM198A	Q9UFP1	575 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CFAP45	Q9UL16	551 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	TCHH	Q07283	1943 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	PLIN4	Q96Q06	1357 aa		11	□□□□□ -0.65
HNRNPC-223	ENST00000556142	TSPY3	P0CV98	308 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	TSPY8	P0CW00	308 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	U2AF2	P26368	475 aa	Known RBP eCLIP	10.99	□□□□□ -0.65	6e-16	■■■■■ 52.2
HNRNPC-223	ENST00000556142	LBX1	P52954	281 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	PICALM	Q13492	652 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	SOGA3	Q5TF21	947 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	BRAP	Q7Z569	592 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	WASF1	Q92558	559 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ABHD8	Q96I13	439 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	SPATA32	Q96LK8	384 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ZNF396	Q96N95	335 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	TMEM47	Q9BQJ4	181 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	RTEL1	Q9NZ71	1219 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	ISY1	Q9ULR0	285 aa	Known RBP	10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	CNTNAP5	Q8WYK1	1306 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	POTEI	P0CG38	1075 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	POTEJ	P0CG39	1038 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	VEGFB	P49765	207 aa		10.99	□□□□□ -0.65
HNRNPC-223	ENST00000556142	FXR2	P51116	673 aa	Known RBP eCLIP	10.99	□□□□□ -0.65	4e-14	■■■■□ 21.2

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