RNA–Protein interactions for RNA: ENST00000555176.5

HNRNPC-217, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-217ENST00000555176 DEF6Q9H4E7 631 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 ZSCAN16Q9H4T2 348 aaPredicted RBP3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 RRAGCQ9HB90 399 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 CBX8Q9HC52 389 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 PDRG1Q9NUG6 133 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 HMG20BQ9P0W2 317 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 STAP2Q9UGK3 403 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 NSFL1CQ9UNZ2 370 aaKnown RBP3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 LRRFIP2Q9Y608 721 aaKnown RBP3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 MRVI1Q9Y6F6 885 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 TTC41PQ6P2S7 1318 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 TTC21AQ8NDW8 1320 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 C1orf167Q5SNV9 1468 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 CD163L1Q9NR16 1453 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 LRRC37A3O60309 1634 aa3.92□□□□□ -1.78
HNRNPC-217ENST00000555176 RFX7Q2KHR2 1363 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 PLCH1Q4KWH8 1693 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 CCDC69A6NI79 296 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 EFCAB8A8MWE9 144 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 FYB1O15117 783 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 PTCD1O75127 700 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 SMC2O95347 1197 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 CELA2BP08218 269 aaPredicted RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 NR3C2P08235 984 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 UBTFL1P0CB47 393 aaPredicted RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 SKILP12757 684 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 CASTP20810 708 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 ATP2B4P23634 1241 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 CASQ1P31415 396 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 SCTRP47872 440 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 AK2P54819 239 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 DNM1Q05193 864 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 CLN3Q13286 438 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 TUBB2AQ13885 445 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 TSGA10IPQ3SY00 556 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 TTC31Q49AM3 519 aaPredicted RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 C6orf118Q5T5N4 469 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 LARP1BQ659C4 914 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 RBM43Q6ZSC3 357 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 HOMER1Q86YM7 354 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 TEX2Q8IWB9 1127 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 CCDC83Q8IWF9 413 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 XRN1Q8IZH2 1706 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 CCAR2Q8N163 923 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 C1orf216Q8TAB5 229 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 STK32AQ8WU08 396 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 PPM1EQ8WY54 764 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 EXOC4Q96A65 974 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 ZNF396Q96N95 335 aaPredicted RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 MEIS3Q99687 375 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 TUBB2BQ9BVA1 445 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 L2HGDHQ9H9P8 463 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 ARFGAP3Q9NP61 516 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 TMPRSS4Q9NRS4 437 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 SLC52A1Q9NWF4 448 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 GEMIN8Q9NWZ8 242 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 PSD3Q9NYI0 1048 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 FMN2Q9NZ56 1722 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 DNMT3LQ9UJW3 386 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 ZNF215Q9UL58 517 aaPredicted RBP3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 ZMIZ1Q9ULJ6 1067 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 MTMR6Q9Y217 621 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 MYH15Q9Y2K3 1946 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 AKAP12Q02952 1782 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 SPATA31A5Q5VU36 1347 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 SPATA31A7Q8IWB4 1347 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 BAHCC1Q9P281 2608 aa3.91□□□□□ -1.78
HNRNPC-217ENST00000555176 TMEM88BA6NKF7 163 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 FAM177BA6PVY3 158 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 SGSM2O43147 1006 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 FOXO3O43524 673 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 SMARCA5O60264 1052 aaPredicted RBP3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 LILRA1O75019 489 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 PNMA6AP0CW24 399 aaPredicted RBP3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 H2AFXP16104 143 aaPredicted RBP3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 MCM3P25205 808 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 GPC1P35052 558 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 PTGIRP43119 386 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 GTF2A1P52655 376 aaPredicted RBP3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 PTSQ03393 145 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 SRSF11Q05519 484 aaKnown RBP3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 OS9Q13438 667 aaPredicted RBP3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 TLR1Q15399 786 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 ZSCAN26Q16670 478 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.9□□□□□ -1.791e-10■□□□□ 11.1
HNRNPC-217ENST00000555176 LRRFIP1Q32MZ4 808 aaKnown RBP3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 ARHGAP29Q52LW3 1261 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 GNASQ5JWF2 1037 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 CCDC30Q5VVM6 783 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 BLOC1S2Q6QNY1 142 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 SLC4A10Q6U841 1118 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 Q6ZVU0 165 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 PODNQ7Z5L7 613 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 CCDC91Q7Z6B0 441 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 LUZP1Q86V48 1076 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 LRRC8AQ8IWT6 810 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 CCDC191Q8NCU4 936 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 GOLGA1Q92805 767 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 CNKSR1Q969H4 720 aa3.9□□□□□ -1.79
HNRNPC-217ENST00000555176 ITPKCQ96DU7 683 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms