RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 DOT1LQ8TEK3 1739 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 ANO6Q4KMQ2 910 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 DNAJC25Q9H1X3 360 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 TRIM75PA6NK02 468 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 CLGNO14967 610 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 PARP1P09874 1014 aaKnown RBP18.9■□□□□ 0.62
PCNX1-209ENST00000554879 ZNF174Q15697 407 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 CLIC4Q9Y696 253 aa18.9■□□□□ 0.62
PCNX1-209ENST00000554879 ST3GAL1Q11201 340 aa18.89■□□□□ 0.62
PCNX1-209ENST00000554879 LRRC47Q8N1G4 583 aaKnown RBP18.89■□□□□ 0.62
PCNX1-209ENST00000554879 RASSF4Q9H2L5 321 aa18.89■□□□□ 0.62
PCNX1-209ENST00000554879 NR1I2O75469 434 aa18.89■□□□□ 0.61
PCNX1-209ENST00000554879 RESTQ13127 1097 aa18.89■□□□□ 0.61
PCNX1-209ENST00000554879 ENAHQ8N8S7 591 aaPredicted RBP18.89■□□□□ 0.61
PCNX1-209ENST00000554879 TDRD7Q8NHU6 1098 aaKnown RBP18.89■□□□□ 0.61
PCNX1-209ENST00000554879 ALDH8A1Q9H2A2 487 aaPredicted RBP18.89■□□□□ 0.61
PCNX1-209ENST00000554879 MYO1BO43795 1136 aa18.88■□□□□ 0.61
PCNX1-209ENST00000554879 CLRN2A0PK11 232 aa18.88■□□□□ 0.61
PCNX1-209ENST00000554879 MCM7P33993 719 aa18.88■□□□□ 0.61
PCNX1-209ENST00000554879 TYRO3Q06418 890 aa18.88■□□□□ 0.61
PCNX1-209ENST00000554879 PIK3AP1Q6ZUJ8 805 aa18.88■□□□□ 0.61
PCNX1-209ENST00000554879 GPKOWQ92917 476 aaPredicted RBP eCLIP18.88■□□□□ 0.61
PCNX1-209ENST00000554879 VIRMAQ69YN4 1812 aaKnown RBP18.88■□□□□ 0.61
PCNX1-209ENST00000554879 GABPB1Q06547 395 aaPredicted RBP18.88■□□□□ 0.61
PCNX1-209ENST00000554879 PLEKHA8P1O95397 391 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 MROH7-TTC4A0A0A0MT08 1334 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 FAM196BA6NMK8 535 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 TCP10L2B9ZVM9 353 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 CTDNEP1O95476 244 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 TTLL6Q8N841 843 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 IGDCC4Q8TDY8 1250 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 ZNF445P59923 1031 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 NR5A1Q13285 461 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 KLHL10Q6JEL2 608 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 CDK5RAP3Q96JB5 506 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 UBA5Q9GZZ9 404 aa18.87■□□□□ 0.61
PCNX1-209ENST00000554879 FRMPD2Q68DX3 1309 aaPredicted RBP18.86■□□□□ 0.61
PCNX1-209ENST00000554879 SUPT20HQ8NEM7 779 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 RIOK1Q9BRS2 568 aaKnown RBP18.86■□□□□ 0.61
PCNX1-209ENST00000554879 ANO10Q9NW15 660 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 SRGNP10124 158 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 ZYXQ15942 572 aaKnown RBP18.86■□□□□ 0.61
PCNX1-209ENST00000554879 NIM1KQ8IY84 436 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
PCNX1-209ENST00000554879 CPVLQ9H3G5 476 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 CTAGE5O15320 804 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 PLSCR1O15162 318 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 AFMP43652 599 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 PROM2Q8N271 834 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 SMARCC2Q8TAQ2 1214 aa18.86■□□□□ 0.61
PCNX1-209ENST00000554879 SSBP05455 408 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCNX1-209ENST00000554879 IFNAR1P17181 557 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 ONECUT3O60422 494 aaPredicted RBP18.85■□□□□ 0.61
PCNX1-209ENST00000554879 CDK8P49336 464 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 POTEAQ6S8J7 498 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 FILIP1Q7Z7B0 1213 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 UBE2Q2LH0YL09 131 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 ECE2O60344 883 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 KIF23Q02241 960 aaPredicted RBP18.85■□□□□ 0.61
PCNX1-209ENST00000554879 GRIK5Q16478 980 aa18.85■□□□□ 0.61
PCNX1-209ENST00000554879 FAM160A1Q05DH4 1040 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 LUZP1Q86V48 1076 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 NOSTRINQ8IVI9 506 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 PCDHA7Q9UN72 937 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 TM4SF1P30408 202 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 HSP90AA4PQ58FG1 418 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 CCDC12Q8WUD4 166 aaPredicted RBP18.84■□□□□ 0.61
PCNX1-209ENST00000554879 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 CCDC148Q8NFR7 591 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 CLIC6Q96NY7 704 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 ZNF277Q9NRM2 450 aaPredicted RBP18.84■□□□□ 0.61
PCNX1-209ENST00000554879 TRMT1Q9NXH9 659 aaKnown RBP18.84■□□□□ 0.61
PCNX1-209ENST00000554879 FMNL1O95466 1100 aaPredicted RBP18.84■□□□□ 0.61
PCNX1-209ENST00000554879 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
PCNX1-209ENST00000554879 PLCH1Q4KWH8 1693 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 VWA3AA6NCI4 1184 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 PLCD1P51178 756 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 ATL3Q6DD88 541 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 CLEC17AQ6ZS10 378 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 MNS1Q8NEH6 495 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 DHX58Q96C10 678 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 SERPINB13Q9UIV8 391 aa18.83■□□□□ 0.61
PCNX1-209ENST00000554879 A0A087WWV3 80 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 SERPINC1P01008 464 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 PCP11498 1178 aaKnown RBP18.83■□□□□ 0.6
PCNX1-209ENST00000554879 CALML3P27482 149 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 GUCY1A2P33402 732 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 KRI1Q8N9T8 703 aaKnown RBP18.83■□□□□ 0.6
PCNX1-209ENST00000554879 ARGLU1Q9NWB6 273 aaPredicted RBP18.83■□□□□ 0.6
PCNX1-209ENST00000554879 HPS5Q9UPZ3 1129 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 PPP2R5BQ15173 497 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 USP17L2Q6R6M4 530 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 LEKR1Q6ZMV7 388 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 UIMC1Q96RL1 719 aa18.83■□□□□ 0.6
PCNX1-209ENST00000554879 FDPSP14324 419 aaKnown RBP18.82■□□□□ 0.6
PCNX1-209ENST00000554879 STX1AQ16623 288 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 CCDC47Q96A33 483 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms