RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 GOLGA8JA6NMD2 632 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 GOLGA8TH3BQL2 631 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 GOLGA8HP0CJ92 632 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 RAD23BP54727 409 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 VSIG1Q86XK7 387 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 KLHL29Q96CT2 875 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 TBC1D2BQ9UPU7 963 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 USO1O60763 962 aaKnown RBP9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 TRPA1O75762 1119 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 PTPROQ16827 1216 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 BMP2KLQ5H9B9 411 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 WDR60Q8WVS4 1066 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 USP28Q96RU2 1077 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.96□□□□□ -0.815e-25■□□□□ 8.2
GTF2A1-203ENST00000553612 TTC41PQ6P2S7 1318 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 SGSM2O43147 1006 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 ERCC5P28715 1186 aaPredicted RBP9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 FAM9CQ8IZT9 166 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 GGNBP2Q9H3C7 697 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 SLC39A2Q9NP94 309 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 ERICH2A1L162 156 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 CKAP4Q07065 602 aaKnown RBP9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 C11orf91Q3C1V1 193 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 STAG2Q8N3U4 1231 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 CLIC6Q96NY7 704 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 KCNK9Q9NPC2 374 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 PCDHGA3Q9Y5H0 932 aa9.96□□□□□ -0.81
GTF2A1-203ENST00000553612 RAB11FIP3O75154 756 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 ITGA7Q13683 1181 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 C6orf163Q5TEZ5 329 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 SFMBT2Q5VUG0 894 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 NAPGQ99747 312 aaPredicted RBP9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 DDX23Q9BUQ8 820 aaKnown RBP9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 EHD4Q9H223 541 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 CCSER2Q9H7U1 834 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 UBTFL6P0CB48 400 aaPredicted RBP9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 IL4RP24394 825 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 HDGFP51858 240 aaKnown RBP9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 GUCY1A3Q02108 690 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 UTS2BQ765I0 119 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 OMA1Q96E52 524 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 PEG3Q9GZU2 1588 aa9.96□□□□□ -0.82
GTF2A1-203ENST00000553612 A0A1B0GVL5 298 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 MTTPP55157 894 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 MTX1Q13505 466 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 SPA17Q15506 151 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 SLC4A8Q2Y0W8 1093 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 CCT7Q99832 543 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 XPO4Q9C0E2 1151 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 ERFP50548 548 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 SRGAP1Q7Z6B7 1085 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 MRRFQ96E11 262 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 NEUROD6Q96NK8 337 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 ATP2A2P16615 1042 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 EIF2B2P49770 351 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 PLIN2Q99541 437 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 MAPK8IP1Q9UQF2 711 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 PPP2R2CQ9Y2T4 447 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 HSPA1AP0DMV8 641 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 HSPA1BP0DMV9 641 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 KCNA3P22001 575 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 PHBP35232 272 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 NLRP6P59044 892 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 MRPS9P82933 396 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 RCN2Q14257 317 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 WASHC4Q2M389 1173 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 CCHCR1Q8TD31 782 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 VTI1AQ96AJ9 217 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 CD2APQ9Y5K6 639 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 AP3B1O00203 1094 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 GMNNO75496 209 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 NNTQ13423 1086 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 RASA3Q14644 834 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 REXO1L1PQ8IX06 675 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 AFAP1Q8N556 730 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 ZNF713Q8N859 430 aaPredicted RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 EURLQ9NYK6 297 aa9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 C9orf78Q9NZ63 289 aaPredicted RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 LARSQ9P2J5 1176 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-203ENST00000553612 MSH2P43246 934 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 IRAK1P51617 712 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 UBAC1Q9BSL1 405 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 EIF2AQ9BY44 585 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 SSX2IPQ9Y2D8 614 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 C21orf2O43822 256 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 PPP1R21Q6ZMI0 780 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 TATDN2Q93075 761 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 IQCDQ96DY2 449 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 TRIM31Q9BZY9 425 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 SYNCQ9H7C4 482 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 OPLAHO14841 1288 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 RFC5P40937 340 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 TWISTNBQ3B726 338 aaPredicted RBP9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 TDRD12Q587J7 1177 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 TTC22Q5TAA0 569 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 ARHGAP27Q6ZUM4 889 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms