RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.53■□□□□ 0.88
PSEN1-206ENST00000553447 KAT14Q9H8E8 782 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 IGKV6D-41A0A0C4DH26 115 aa20.52■□□□□ 0.88
PSEN1-206ENST00000553447 CCDC196A0A1B0GTZ2 297 aa20.52■□□□□ 0.88
PSEN1-206ENST00000553447 FAM196BA6NMK8 535 aa20.52■□□□□ 0.88
PSEN1-206ENST00000553447 PPP2R5BQ15173 497 aa20.52■□□□□ 0.88
PSEN1-206ENST00000553447 NTRK3Q16288 839 aa20.52■□□□□ 0.88
PSEN1-206ENST00000553447 CEP95Q96GE4 821 aa20.52■□□□□ 0.88
PSEN1-206ENST00000553447 KIF3AQ9Y496 699 aa20.52■□□□□ 0.88
PSEN1-206ENST00000553447 SOCS7O14512 581 aa20.51■□□□□ 0.87
PSEN1-206ENST00000553447 FDPSP14324 419 aaKnown RBP20.51■□□□□ 0.87
PSEN1-206ENST00000553447 TMEM47Q9BQJ4 181 aa20.51■□□□□ 0.87
PSEN1-206ENST00000553447 TMEM39BQ9GZU3 492 aa20.51■□□□□ 0.87
PSEN1-206ENST00000553447 PGAP2Q9UHJ9 254 aa20.51■□□□□ 0.87
PSEN1-206ENST00000553447 HERC5Q9UII4 1024 aaKnown RBP20.51■□□□□ 0.87
PSEN1-206ENST00000553447 STX8Q9UNK0 236 aa20.51■□□□□ 0.87
PSEN1-206ENST00000553447 MTMR6Q9Y217 621 aa20.51■□□□□ 0.87
PSEN1-206ENST00000553447 GRIN3BO60391 1043 aa20.5■□□□□ 0.87
PSEN1-206ENST00000553447 DDNO94850 711 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-206ENST00000553447 ZSCAN22P10073 491 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-206ENST00000553447 TNFAIP1Q13829 316 aa20.5■□□□□ 0.87
PSEN1-206ENST00000553447 CERKLQ49MI3 558 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-206ENST00000553447 PNMA1Q8ND90 353 aa20.5■□□□□ 0.87
PSEN1-206ENST00000553447 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
PSEN1-206ENST00000553447 ORC3Q9UBD5 711 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-206ENST00000553447 HACL1Q9UJ83 578 aa20.5■□□□□ 0.87
PSEN1-206ENST00000553447 STK36Q9NRP7 1315 aa20.5■□□□□ 0.87
PSEN1-206ENST00000553447 PPFIA3O75145 1194 aa20.49■□□□□ 0.87
PSEN1-206ENST00000553447 TOP1P11387 765 aaKnown RBP20.49■□□□□ 0.87
PSEN1-206ENST00000553447 IFNAR1P17181 557 aa20.49■□□□□ 0.87
PSEN1-206ENST00000553447 NFKBIBQ15653 356 aa20.49■□□□□ 0.87
PSEN1-206ENST00000553447 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-206ENST00000553447 CTCFLQ8NI51 663 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-206ENST00000553447 TRPM4Q8TD43 1214 aa20.49■□□□□ 0.87
PSEN1-206ENST00000553447 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-206ENST00000553447 MAP3K14Q99558 947 aa20.49■□□□□ 0.87
PSEN1-206ENST00000553447 MTMR4Q9NYA4 1195 aa20.49■□□□□ 0.87
PSEN1-206ENST00000553447 ASTN2O75129 1339 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-206ENST00000553447 VPS37CA5D8V6 355 aaPredicted RBP20.48■□□□□ 0.87
PSEN1-206ENST00000553447 MPHOSPH10O00566 681 aaKnown RBP20.48■□□□□ 0.87
PSEN1-206ENST00000553447 EPS15P42566 896 aa20.48■□□□□ 0.87
PSEN1-206ENST00000553447 RASA3Q14644 834 aa20.48■□□□□ 0.87
PSEN1-206ENST00000553447 CLEC17AQ6ZS10 378 aa20.48■□□□□ 0.87
PSEN1-206ENST00000553447 GBP4Q96PP9 640 aa20.48■□□□□ 0.87
PSEN1-206ENST00000553447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.48■□□□□ 0.87
PSEN1-206ENST00000553447 MYH15Q9Y2K3 1946 aa20.48■□□□□ 0.87
PSEN1-206ENST00000553447 ATAD5Q96QE3 1844 aa20.48■□□□□ 0.87
PSEN1-206ENST00000553447 TBC1D12O60347 775 aa20.47■□□□□ 0.87
PSEN1-206ENST00000553447 FMNL1O95466 1100 aaPredicted RBP20.47■□□□□ 0.87
PSEN1-206ENST00000553447 SSRP1Q08945 709 aaKnown RBP20.47■□□□□ 0.87
PSEN1-206ENST00000553447 GRM4Q14833 912 aa20.47■□□□□ 0.87
PSEN1-206ENST00000553447 PPP4R3BQ5MIZ7 849 aa20.47■□□□□ 0.87
PSEN1-206ENST00000553447 CDAN1Q8IWY9 1227 aa20.47■□□□□ 0.87
PSEN1-206ENST00000553447 PHKBQ93100 1093 aa20.47■□□□□ 0.87
PSEN1-206ENST00000553447 ZC3H4Q9UPT8 1303 aaKnown RBP20.47■□□□□ 0.87
PSEN1-206ENST00000553447 TTLL1O95922 423 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 F13A1P00488 732 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 LMOD1P29536 600 aaPredicted RBP20.46■□□□□ 0.87
PSEN1-206ENST00000553447 KIF5BP33176 963 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 TMTC3Q6ZXV5 915 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 CDC37L1Q7L3B6 337 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 NBPF11Q86T75 865 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 APOBEC3FQ8IUX4 373 aaKnown RBP20.46■□□□□ 0.87
PSEN1-206ENST00000553447 TEPSINQ96N21 525 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 SLC26A6Q9BXS9 759 aa20.46■□□□□ 0.87
PSEN1-206ENST00000553447 POLR2AP24928 1970 aaKnown RBP20.46■□□□□ 0.87
PSEN1-206ENST00000553447 TCHHQ07283 1943 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 H3BQV1 296 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 PLEKHA8P1O95397 391 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 BAG4O95429 457 aaKnown RBP20.45■□□□□ 0.86
PSEN1-206ENST00000553447 MAP3K10Q02779 954 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 IFFO2Q5TF58 517 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 ANGEL2Q5VTE6 544 aaKnown RBP20.45■□□□□ 0.86
PSEN1-206ENST00000553447 TMEM179Q6ZVK1 233 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 TRIM22Q8IYM9 498 aa20.45■□□□□ 0.86
PSEN1-206ENST00000553447 CMTR1Q8N1G2 835 aaKnown RBP20.45■□□□□ 0.86
PSEN1-206ENST00000553447 SCAF8Q9UPN6 1271 aaKnown RBP20.45■□□□□ 0.86
PSEN1-206ENST00000553447 GDF11O95390 407 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 MCM4P33991 863 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 FOSBP53539 338 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 HIRAP54198 1017 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-206ENST00000553447 FUT2Q10981 343 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 RRP1BQ14684 758 aaKnown RBP20.44■□□□□ 0.86
PSEN1-206ENST00000553447 SHROOM1Q2M3G4 852 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-206ENST00000553447 DPY19L2Q6NUT2 758 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 RGS22Q8NE09 1264 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 RNF26Q9BY78 433 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-206ENST00000553447 DEFB129Q9H1M3 183 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 KANSL2Q9H9L4 492 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 ADARB2Q9NS39 739 aaKnown RBP20.44■□□□□ 0.86
PSEN1-206ENST00000553447 CLIP2Q9UDT6 1046 aa20.44■□□□□ 0.86
PSEN1-206ENST00000553447 SCN4AP35499 1836 aa20.43■□□□□ 0.86
PSEN1-206ENST00000553447 GUCY1A2P33402 732 aa20.43■□□□□ 0.86
PSEN1-206ENST00000553447 SEPT2Q15019 361 aa20.43■□□□□ 0.86
PSEN1-206ENST00000553447 WASF1Q92558 559 aa20.43■□□□□ 0.86
PSEN1-206ENST00000553447 C8orf76Q96K31 380 aa20.43■□□□□ 0.86
PSEN1-206ENST00000553447 ALG1Q9BT22 464 aa20.43■□□□□ 0.86
PSEN1-206ENST00000553447 CABP5Q9NP86 173 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms