RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ZNF576Q9H609 170 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 COPRSQ9NQ92 184 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 POGKQ9P215 609 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 GGA1Q9UJY5 639 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 GDF2Q9UK05 429 aaPredicted RBP3.39□□□□□ -1.87
CPSF6-207ENST00000551516 PIK3C2AO00443 1686 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 ABCC6O95255 1503 aa3.39□□□□□ -1.87
CPSF6-207ENST00000551516 TNS2Q63HR2 1409 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 PPIP5K1Q6PFW1 1433 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 H3BM21 787 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 EIF4EBP3O60516 100 aaPredicted RBP3.38□□□□□ -1.87
CPSF6-207ENST00000551516 CDC27P30260 824 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 LIG3P49916 1009 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 ZNF157P51786 506 aaPredicted RBP3.38□□□□□ -1.87
CPSF6-207ENST00000551516 PAK2Q13177 524 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 GAS6Q14393 721 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 DDB1Q16531 1140 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 TTBK2Q6IQ55 1244 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 GDF6Q6KF10 455 aaPredicted RBP3.38□□□□□ -1.87
CPSF6-207ENST00000551516 PSAPL1Q6NUJ1 521 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 FCHSD1Q86WN1 690 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 KIAA0825Q8IV33 1275 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 GPR161Q8N6U8 529 aaKnown RBP3.38□□□□□ -1.87
CPSF6-207ENST00000551516 GPRASP2Q96D09 838 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 PUS7Q96PZ0 661 aaKnown RBP3.38□□□□□ -1.87
CPSF6-207ENST00000551516 GMLQ99445 158 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 LPIN3Q9BQK8 851 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 TRIM56Q9BRZ2 755 aaKnown RBP3.38□□□□□ -1.87
CPSF6-207ENST00000551516 COL25A1Q9BXS0 654 aaPredicted RBP3.38□□□□□ -1.87
CPSF6-207ENST00000551516 EMILIN2Q9BXX0 1053 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 LACRTQ9GZZ8 138 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 ADAM19Q9H013 955 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 KLF15Q9UIH9 416 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 SHANK3Q9BYB0 1731 aa3.38□□□□□ -1.87
CPSF6-207ENST00000551516 SBF2Q86WG5 1849 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 MYOM1P52179 1685 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 USP54Q70EL1 1684 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 F6X3S4 739 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 ENC1O14682 589 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 PF4P02776 101 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 CELA3AP09093 270 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 NME2P22392 152 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 FBLN1P23142 703 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 GTF2F1P35269 517 aaKnown RBP eCLIP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 GJA8P48165 433 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 ARL4DP49703 201 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 RPS26P62854 115 aaKnown RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 MAP3K10Q02779 954 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 SRSF11Q05519 484 aaKnown RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 PCDH1Q08174 1060 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 FAAP100Q0VG06 881 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 CAMK2GQ13555 558 aaPredicted RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 IKBKEQ14164 716 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 LRRC14Q15048 493 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 SNAP47Q5SQN1 464 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 ZNF787Q6DD87 383 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 KANK3Q6NY19 840 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 FAM117BQ6P1L5 589 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 COL23A1Q86Y22 540 aaPredicted RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 ZNF296Q8WUU4 475 aaPredicted RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 NUDT8Q8WV74 236 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.37□□□□□ -1.877e-7■□□□□ 9.9
CPSF6-207ENST00000551516 CBX8Q9HC52 389 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 JPH1Q9HDC5 661 aaPredicted RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 SH2B1Q9NRF2 756 aaPredicted RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 NAGPAQ9UK23 515 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 SOX13Q9UN79 622 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 CYP8B1Q9UNU6 501 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 TRIM33Q9UPN9 1127 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 TLR6Q9Y2C9 796 aa3.37□□□□□ -1.87
CPSF6-207ENST00000551516 SUPT16HQ9Y5B9 1047 aaKnown RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 CENPJQ9HC77 1338 aaPredicted RBP3.37□□□□□ -1.87
CPSF6-207ENST00000551516 NSD3Q9BZ95 1437 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 LCE2BO14633 110 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 TERTO14746 1132 aaKnown RBP3.36□□□□□ -1.87
CPSF6-207ENST00000551516 LILRB5O75023 590 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 STK10O94804 968 aaKnown RBP3.36□□□□□ -1.87
CPSF6-207ENST00000551516 B3GALT4O96024 378 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 SSBP05455 408 aaKnown RBP eCLIP3.36□□□□□ -1.87
CPSF6-207ENST00000551516 VSIG8P0DPA2 414 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 ESRRAP11474 423 aaPredicted RBP3.36□□□□□ -1.87
CPSF6-207ENST00000551516 ATF4P18848 351 aaPredicted RBP3.36□□□□□ -1.87
CPSF6-207ENST00000551516 KCNA3P22001 575 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 LMNB2Q03252 620 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 FAM160A1Q05DH4 1040 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 ZNF423Q2M1K9 1284 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 PCNX4Q63HM2 1172 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 FBXL19Q6PCT2 694 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 AGMOQ6ZNB7 445 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 SLCO4C1Q6ZQN7 724 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 VN1R5Q7Z5H4 357 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 NME9Q86XW9 330 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 TRIM42Q8IWZ5 723 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 IL22RA1Q8N6P7 574 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 GOLM1Q8NBJ4 401 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 GALNT6Q8NCL4 622 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 PHC3Q8NDX5 983 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 RASGRP4Q8TDF6 673 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 EDARADDQ8WWZ3 215 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 IP6K1Q92551 441 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms