RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 KDM4AO75164 1064 aa15.43■□□□□ 0.06
RAB5C-206ENST00000550406 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
RAB5C-206ENST00000550406 MS4A4AQ96JQ5 239 aa15.43■□□□□ 0.06
RAB5C-206ENST00000550406 BACH2Q9BYV9 841 aa15.43■□□□□ 0.06
RAB5C-206ENST00000550406 KCNH4Q9UQ05 1017 aa15.43■□□□□ 0.06
RAB5C-206ENST00000550406 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
RAB5C-206ENST00000550406 LOC285556D6RIA3 1793 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 TSPY2A6NKD2 308 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 TSPY3P0CV98 308 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 TSPY8P0CW00 308 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 ZBTB48P10074 688 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-206ENST00000550406 EEF2P13639 858 aaKnown RBP15.42■□□□□ 0.06
RAB5C-206ENST00000550406 ECE1P42892 770 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 NOVP48745 357 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 ANTXR2P58335 489 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 SPP2Q13103 211 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 MOGSQ13724 837 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 PAXIP1Q6ZW49 1069 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-206ENST00000550406 MB21D2Q8IYB1 491 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-206ENST00000550406 ZNF280CQ8ND82 737 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 CEP95Q96GE4 821 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 KRT23Q9C075 422 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 KANSL2Q9H9L4 492 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 TCP11L1Q9NUJ3 509 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 MTMR4Q9NYA4 1195 aa15.42■□□□□ 0.06
RAB5C-206ENST00000550406 GRM1Q13255 1194 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 DGKZQ13574 1117 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 KIAA1755Q5JYT7 1200 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 RCSD1Q6JBY9 416 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 NCOA7Q8NI08 942 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 ESR2Q92731 530 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 ZKSCAN3Q9BRR0 538 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 CNNM2Q9H8M5 875 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 NYAP2Q9P242 653 aa15.41■□□□□ 0.06
RAB5C-206ENST00000550406 TRIM75PA6NK02 468 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 CXCL11O14625 94 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
RAB5C-206ENST00000550406 ICA1Q05084 483 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 CHST3Q7LGC8 479 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 MKL1Q969V6 931 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 TBC1D2Q9BYX2 928 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 AS3MTQ9HBK9 375 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
RAB5C-206ENST00000550406 A0A0G2JLL6 359 aaPredicted RBP15.39■□□□□ 0.05
RAB5C-206ENST00000550406 TESPA1A2RU30 521 aaPredicted RBP15.39■□□□□ 0.05
RAB5C-206ENST00000550406 CPA1P15085 419 aa15.39■□□□□ 0.05
RAB5C-206ENST00000550406 BACE1P56817 501 aa15.39■□□□□ 0.05
RAB5C-206ENST00000550406 EXOSC10Q01780 885 aaKnown RBP15.39■□□□□ 0.05
RAB5C-206ENST00000550406 SH3D19Q5HYK7 790 aa15.39■□□□□ 0.05
RAB5C-206ENST00000550406 PRRT2Q7Z6L0 340 aaPredicted RBP15.39■□□□□ 0.05
RAB5C-206ENST00000550406 IL17RAQ96F46 866 aa15.39■□□□□ 0.05
RAB5C-206ENST00000550406 NEK1Q96PY6 1258 aa15.39■□□□□ 0.05
RAB5C-206ENST00000550406 PTPN18Q99952 460 aa15.39■□□□□ 0.05
RAB5C-206ENST00000550406 CLIP2Q9UDT6 1046 aa15.39■□□□□ 0.05
RAB5C-206ENST00000550406 PARP14Q460N5 1801 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 USP17L10C9JJH3 530 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 EIF5BO60841 1220 aaKnown RBP15.38■□□□□ 0.05
RAB5C-206ENST00000550406 ZKSCAN1P17029 563 aaPredicted RBP15.38■□□□□ 0.05
RAB5C-206ENST00000550406 NT5C2P49902 561 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 GTF2A2P52657 109 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 TRDNQ13061 729 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 NOGQ13253 232 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 MTMR2Q13614 643 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 SEC23AQ15436 765 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 GPAT2Q6NUI2 795 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 IGDCC4Q8TDY8 1250 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 BRI3BPQ8WY22 251 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 ANKS1AQ92625 1134 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 ZSCAN10Q96SZ4 725 aaPredicted RBP15.38■□□□□ 0.05
RAB5C-206ENST00000550406 KIAA1683Q9H0B3 1180 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 SENP2Q9HC62 589 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 GPHNQ9NQX3 736 aaPredicted RBP15.38■□□□□ 0.05
RAB5C-206ENST00000550406 TMX2Q9Y320 296 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 RLFQ13129 1914 aa15.38■□□□□ 0.05
RAB5C-206ENST00000550406 MANSC4A6NHS7 340 aaPredicted RBP15.37■□□□□ 0.05
RAB5C-206ENST00000550406 C19orf81C9J6K1 198 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 TTLL1O95922 423 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 TM4SF4P48230 202 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 HMGCS2P54868 508 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 ATP2B2Q01814 1243 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 SNAPC2Q13487 334 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 KRT32Q14532 448 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 ZYXQ15942 572 aaKnown RBP15.37■□□□□ 0.05
RAB5C-206ENST00000550406 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
RAB5C-206ENST00000550406 ENAHQ8N8S7 591 aaPredicted RBP15.37■□□□□ 0.05
RAB5C-206ENST00000550406 JAKMIP1Q96N16 626 aaKnown RBP15.37■□□□□ 0.05
RAB5C-206ENST00000550406 TMEM47Q9BQJ4 181 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
RAB5C-206ENST00000550406 CCL15-CCL14A0A0B4J2E2 113 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
RAB5C-206ENST00000550406 PRC1O43663 620 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 MCCP23508 829 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 MCM5P33992 734 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 MAP2K2P36507 400 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 CCL15Q16663 113 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 USP17L2Q6R6M4 530 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 DGKHQ86XP1 1220 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 C12orf42Q96LP6 360 aa15.36■□□□□ 0.05
RAB5C-206ENST00000550406 TCEANC2Q96MN5 208 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms