RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 VEZTQ9HBM0 779 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 HERC5Q9UII4 1024 aaKnown RBP15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 MTMR6Q9Y217 621 aa15.95■□□□□ 0.14
CALCOCO1-214ENST00000549613 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 VPS37CA5D8V6 355 aaPredicted RBP15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 DDX11L8A8MPP1 907 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 WNT10BO00744 389 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 GRIN3BO60391 1043 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 NMT2O60551 498 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 BAG4O95429 457 aaKnown RBP15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 F13A1P00488 732 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 TOP1P11387 765 aaKnown RBP15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 CDC27P30260 824 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 SHMT1P34896 483 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 GNAQP50148 359 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 TROAPQ12815 778 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 TNFAIP1Q13829 316 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 SH3BP5LQ7L8J4 393 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 MICALL2Q8IY33 904 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 CCDC144CPQ8IYA2 1237 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 FAM217BQ9NTX9 383 aaPredicted RBP15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 PLIN4Q96Q06 1357 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 STK36Q9NRP7 1315 aa15.94■□□□□ 0.14
CALCOCO1-214ENST00000549613 FDPSP14324 419 aaKnown RBP15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 NOVP48745 357 aa15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 APLP1P51693 650 aa15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 NTRK3Q16288 839 aa15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 CERKLQ49MI3 558 aaPredicted RBP15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 RBM26Q5T8P6 1007 aaKnown RBP15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 FOXD4L5Q5VV16 416 aaPredicted RBP15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 DNAJC5GQ8N7S2 189 aa15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 PNMA1Q8ND90 353 aa15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 FOXD4L4Q8WXT5 416 aaPredicted RBP15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 STX8Q9UNK0 236 aa15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 ZNF541Q9H0D2 1346 aa15.93■□□□□ 0.14
CALCOCO1-214ENST00000549613 FMNL1O95466 1100 aaPredicted RBP15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 AKR1B1P15121 316 aa15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 AKAP17AQ02040 695 aaKnown RBP15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 NBPF9Q3BBW0 867 aa15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 TATDN1Q6P1N9 297 aa15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 ZNF526Q8TF50 670 aaPredicted RBP15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 C8orf76Q96K31 380 aa15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 CSRNP1Q96S65 589 aa15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 TMEM47Q9BQJ4 181 aa15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 RNF181Q9P0P0 153 aa15.92■□□□□ 0.14
CALCOCO1-214ENST00000549613 IGKV6D-41A0A0C4DH26 115 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 MPHOSPH10O00566 681 aaKnown RBP15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 TBC1D12O60347 775 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 DEXIO95424 95 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 KIF4BQ2VIQ3 1234 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 CEP95Q96GE4 821 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 SLC26A6Q9BXS9 759 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 RNF26Q9BY78 433 aaPredicted RBP15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 ZSCAN16Q9H4T2 348 aaPredicted RBP15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 CABP5Q9NP86 173 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 MTMR4Q9NYA4 1195 aa15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 RBM27Q9P2N5 1060 aaKnown RBP15.91■□□□□ 0.14
CALCOCO1-214ENST00000549613 MYH8P13535 1937 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 CNTNAP1P78357 1384 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 DTNBO60941 627 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 TTLL1O95922 423 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 TRIM29Q14134 588 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 NBR1Q14596 966 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 GRM4Q14833 912 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 TMEM179Q6ZVK1 233 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 SAMD7Q7Z3H4 446 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 ALG1Q9BT22 464 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 KANSL2Q9H9L4 492 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 GPRC5DQ9NZD1 345 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 SBF1O95248 1867 aa15.9■□□□□ 0.14
CALCOCO1-214ENST00000549613 SHTN1A0MZ66 631 aa15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 PRPF3O43395 683 aaKnown RBP15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 ABCB5Q2M3G0 1257 aa15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 TBC1D10BQ4KMP7 808 aaPredicted RBP15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 TMTC3Q6ZXV5 915 aa15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 FBXO18Q8NFZ0 1043 aa15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 PHKBQ93100 1093 aa15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 DNAJC18Q9H819 358 aa15.89■□□□□ 0.13
CALCOCO1-214ENST00000549613 XBP1P17861 261 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 SMARCA1P28370 1054 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 RASA3Q14644 834 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 CSPP1Q1MSJ5 1256 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 DPY19L2Q6NUT2 758 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 CDC37L1Q7L3B6 337 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 APOBEC3FQ8IUX4 373 aaKnown RBP15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 HOOK2Q96ED9 719 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 NYAP2Q9P242 653 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 PCDH10Q9P2E7 1040 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 CLIP2Q9UDT6 1046 aa15.88■□□□□ 0.13
CALCOCO1-214ENST00000549613 PARP1P09874 1014 aaKnown RBP15.87■□□□□ 0.13
CALCOCO1-214ENST00000549613 MAP3K10Q02779 954 aa15.87■□□□□ 0.13
CALCOCO1-214ENST00000549613 SKOR2Q2VWA4 1001 aaPredicted RBP15.87■□□□□ 0.13
CALCOCO1-214ENST00000549613 MCTP1Q6DN14 999 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms