RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 CBLL1Q75N03 491 aa8.23□□□□□ -1.09
USP15-213ENST00000549268 SPRED2Q7Z698 418 aa8.23□□□□□ -1.09
USP15-213ENST00000549268 SPACA3Q8IXA5 215 aa8.23□□□□□ -1.09
USP15-213ENST00000549268 CYP7A1P22680 504 aa8.22□□□□□ -1.09
USP15-213ENST00000549268 SFRP5Q5T4F7 317 aa8.22□□□□□ -1.09
USP15-213ENST00000549268 REC114Q7Z4M0 266 aa8.22□□□□□ -1.09
USP15-213ENST00000549268 SPATA32Q96LK8 384 aa8.22□□□□□ -1.09
USP15-213ENST00000549268 TPX2Q9ULW0 747 aaKnown RBP8.22□□□□□ -1.09
USP15-213ENST00000549268 GRIN3BO60391 1043 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 PLCG1P19174 1290 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 ITIH2P19823 946 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 DNAJA1P31689 397 aaKnown RBP8.21□□□□□ -1.1
USP15-213ENST00000549268 CRKP46108 304 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 BNIP3Q12983 259 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 AOC3Q16853 763 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 SLFN12Q8IYM2 578 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 RIN3Q8TB24 985 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 ASB11Q8WXH4 323 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 BRMS1Q9HCU9 246 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 CORINQ9Y5Q5 1042 aa8.21□□□□□ -1.1
USP15-213ENST00000549268 CD8BP10966 210 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 FUT4P22083 530 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 ETV3P41162 512 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 KIR3DL1P43629 444 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 ZNF165P49910 485 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 YARSP54577 528 aaKnown RBP8.2□□□□□ -1.1
USP15-213ENST00000549268 FBXW10Q5XX13 1052 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 GK5Q6ZS86 529 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 EFR3BQ9Y2G0 817 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
USP15-213ENST00000549268 CNTNAP4Q9C0A0 1308 aa8.2□□□□□ -1.1
USP15-213ENST00000549268 TAL1P17542 331 aaPredicted RBP8.19□□□□□ -1.1
USP15-213ENST00000549268 ARID5AQ03989 594 aa8.19□□□□□ -1.1
USP15-213ENST00000549268 ZNF574Q6ZN55 896 aaPredicted RBP8.19□□□□□ -1.1
USP15-213ENST00000549268 MFSD4AQ8N468 514 aa8.19□□□□□ -1.1
USP15-213ENST00000549268 DNAJB8Q8NHS0 232 aa8.19□□□□□ -1.1
USP15-213ENST00000549268 CPLX3Q8WVH0 158 aa8.19□□□□□ -1.1
USP15-213ENST00000549268 C8orf37Q96NL8 207 aa8.19□□□□□ -1.1
USP15-213ENST00000549268 CEP131Q9UPN4 1083 aa8.19□□□□□ -1.1
USP15-213ENST00000549268 ATE1O95260 518 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 HTR3BO95264 441 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 GJA8P48165 433 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 NASPP49321 788 aaPredicted RBP8.18□□□□□ -1.1
USP15-213ENST00000549268 MLECQ14165 292 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 SLITRK4Q8IW52 837 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 XAGE3Q8WTP9 111 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 CYB5D2Q8WUJ1 264 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 FERD3LQ96RJ6 166 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 DPH2Q9BQC3 489 aaPredicted RBP8.18□□□□□ -1.1
USP15-213ENST00000549268 TINF2Q9BSI4 451 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 GINM1Q9NU53 330 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 REV1Q9UBZ9 1251 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 PCDHB14Q9Y5E9 798 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 CAPN6Q9Y6Q1 641 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 PITPNM2Q9BZ72 1349 aa8.18□□□□□ -1.1
USP15-213ENST00000549268 PLCL1Q15111 1095 aa8.17□□□□□ -1.1
USP15-213ENST00000549268 ANGEL2Q5VTE6 544 aaKnown RBP8.17□□□□□ -1.1
USP15-213ENST00000549268 CDH24Q86UP0 819 aa8.17□□□□□ -1.1
USP15-213ENST00000549268 FAM13CQ8NE31 585 aa8.17□□□□□ -1.1
USP15-213ENST00000549268 PIWIL2Q8TC59 973 aaKnown RBP8.17□□□□□ -1.1
USP15-213ENST00000549268 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
USP15-213ENST00000549268 PPP1R13LQ8WUF5 828 aa8.17□□□□□ -1.1
USP15-213ENST00000549268 CRBNQ96SW2 442 aa8.17□□□□□ -1.1
USP15-213ENST00000549268 PPP1R1BQ9UD71 204 aaPredicted RBP8.17□□□□□ -1.1
USP15-213ENST00000549268 ST14Q9Y5Y6 855 aa8.17□□□□□ -1.1
USP15-213ENST00000549268 PRR33A8MZF0 331 aa8.16□□□□□ -1.1
USP15-213ENST00000549268 FAM155AB1AL88 458 aaPredicted RBP8.16□□□□□ -1.1
USP15-213ENST00000549268 SSBP05455 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP15-213ENST00000549268 COL9A2Q14055 689 aaPredicted RBP8.16□□□□□ -1.1
USP15-213ENST00000549268 THAP5Q7Z6K1 395 aa8.16□□□□□ -1.1
USP15-213ENST00000549268 SLC43A3Q8NBI5 491 aa8.16□□□□□ -1.1
USP15-213ENST00000549268 SEC16BQ96JE7 1060 aa8.16□□□□□ -1.1
USP15-213ENST00000549268 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP15-213ENST00000549268 EHMT1Q9H9B1 1298 aa8.16□□□□□ -1.1
USP15-213ENST00000549268 SEMA3GQ9NS98 782 aa8.16□□□□□ -1.1
USP15-213ENST00000549268 LMCD1Q9NZU5 365 aa8.16□□□□□ -1.1
USP15-213ENST00000549268 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
USP15-213ENST00000549268 UPK3BL1B0FP48 263 aa8.15□□□□□ -1.1
USP15-213ENST00000549268 UPK3BL2E5RIL1 263 aa8.15□□□□□ -1.1
USP15-213ENST00000549268 ITGB5P18084 799 aa8.15□□□□□ -1.1
USP15-213ENST00000549268 ATF4P18848 351 aaPredicted RBP8.15□□□□□ -1.1
USP15-213ENST00000549268 CLCQ05315 142 aa8.15□□□□□ -1.1
USP15-213ENST00000549268 ZNF792Q3KQV3 632 aa8.15□□□□□ -1.1
USP15-213ENST00000549268 SLC23A3Q6PIS1 610 aa8.15□□□□□ -1.1
USP15-213ENST00000549268 REXO1Q8N1G1 1221 aaKnown RBP8.15□□□□□ -1.1
USP15-213ENST00000549268 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.1
USP15-213ENST00000549268 CCDC81Q6ZN84 652 aa8.14□□□□□ -1.11
USP15-213ENST00000549268 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
USP15-213ENST00000549268 KLHL3Q9UH77 587 aa8.14□□□□□ -1.11
USP15-213ENST00000549268 PPT2Q9UMR5 302 aa8.14□□□□□ -1.11
USP15-213ENST00000549268 CBX7O95931 251 aa8.13□□□□□ -1.11
USP15-213ENST00000549268 JUNBP17275 347 aaPredicted RBP8.13□□□□□ -1.11
USP15-213ENST00000549268 ATP2B1P20020 1258 aa8.13□□□□□ -1.11
USP15-213ENST00000549268 CD96P40200 585 aa8.13□□□□□ -1.11
USP15-213ENST00000549268 IKZF1Q13422 519 aa8.13□□□□□ -1.11
USP15-213ENST00000549268 PI4K2BQ8TCG2 481 aa8.13□□□□□ -1.11
USP15-213ENST00000549268 CCDC74BQ96LY2 380 aa8.13□□□□□ -1.11
USP15-213ENST00000549268 HSPA12BQ96MM6 686 aa8.13□□□□□ -1.11
USP15-213ENST00000549268 MBNL3Q9NUK0 354 aaKnown RBP8.13□□□□□ -1.11
USP15-213ENST00000549268 CHURC1-FNTBB4DL54 471 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms