RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CRNKL1Q9BZJ0 848 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 TAB2Q9NYJ8 693 aa15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 N4BP3O15049 544 aa15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 TFRCP02786 760 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 CGNQ9P2M7 1197 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 HPSEQ9Y251 543 aa15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 NYAP1Q6ZVC0 841 aa15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 STAG2Q8N3U4 1231 aa15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 SRBD1Q8N5C6 995 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 IGSF22Q8N9C0 903 aa15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 HSD3B7Q9H2F3 369 aa15.55■□□□□ 0.08
PRPF40B-209ENST00000548825 USP54Q70EL1 1684 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 TRERF1Q96PN7 1200 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 NUP88Q99567 741 aaPredicted RBP15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 OSBPL5Q9H0X9 879 aaPredicted RBP15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 IMPACTQ9P2X3 320 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 CASQ1P31415 396 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 PICALMQ13492 652 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 WDR24Q96S15 920 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 PPP2R2CQ9Y2T4 447 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 LMTK3Q96Q04 1460 aa15.54■□□□□ 0.08
PRPF40B-209ENST00000548825 FAM170AA1A519 330 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 CTIFO43310 598 aaKnown RBP15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 VSTM4Q8IW00 320 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 SHISA4Q96DD7 197 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 INTS13Q9NVM9 706 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 LAMA4Q16363 1823 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 DCCP43146 1447 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 PHRF1Q9P1Y6 1649 aaKnown RBP15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 MYO5AQ9Y4I1 1855 aaKnown RBP15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 TSPY3P0CV98 308 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 TSPY8P0CW00 308 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 ETF1P62495 437 aaKnown RBP15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 SPECC1LQ69YQ0 1117 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 FOXP1Q9H334 677 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 ADAMTSL3P82987 1691 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 CCDC194A0A1B0GVG4 234 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 INF2Q27J81 1249 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 ZNF444Q8N0Y2 327 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 ANKRD7Q92527 254 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 GDAQ9Y2T3 454 aa15.53■□□□□ 0.08
PRPF40B-209ENST00000548825 SYNRGQ9UMZ2 1314 aa15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 IKBKBO14920 756 aa15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 ALX1Q15699 326 aa15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 NOL10Q9BSC4 688 aaKnown RBP15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 DCP1AQ9NPI6 582 aaPredicted RBP15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 DACH1Q9UI36 760 aa15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 TNS2Q63HR2 1409 aa15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 COL18A1P39060 1754 aa15.52■□□□□ 0.08
PRPF40B-209ENST00000548825 ERO1AQ96HE7 468 aa15.52■□□□□ 0.07
PRPF40B-209ENST00000548825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.52■□□□□ 0.07
PRPF40B-209ENST00000548825 STRCP1A6NGW2 1772 aa15.52■□□□□ 0.07
PRPF40B-209ENST00000548825 KDM4FA0A1W2PPD8 638 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 RIMBP2O15034 1052 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 RBL2Q08999 1139 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 CUL4BQ13620 913 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 SKIDA1Q1XH10 827 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 FILIP1LQ4L180 1135 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 FBXL16Q8N461 479 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 ZNF384Q8TF68 577 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 PAGE5Q96GU1 130 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 RIOK1Q9BRS2 568 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 SRPRBQ9Y5M8 271 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 TRIM49BA6NDI0 452 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 CASP14P31944 242 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 RFC4P35249 363 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 NFIXQ14938 502 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 PKN1Q16512 942 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 LETM2Q2VYF4 491 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 ZNF512BQ96KM6 892 aaPredicted RBP15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 TIGD1Q96MW7 591 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 UBA5Q9GZZ9 404 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 STAT6P42226 847 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 GRIK5Q16478 980 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 ZNF397Q8NF99 534 aaPredicted RBP15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 CCNL1Q9UK58 526 aaPredicted RBP15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 TFR2Q9UP52 801 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 RTL9Q8NET4 1388 aa15.51■□□□□ 0.07
PRPF40B-209ENST00000548825 C6orf229H3BNL8 230 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 ZSCAN12O43309 604 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 KIF4BQ2VIQ3 1234 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 CLEC10AQ8IUN9 316 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 MLKLQ8NB16 471 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 PNMA1Q8ND90 353 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 ZFP91Q96JP5 570 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 ZNF569Q5MCW4 686 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 ACRBPQ8NEB7 543 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 NSUN4Q96CB9 384 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 RNF26Q9BY78 433 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 WDR19Q8NEZ3 1342 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 LDHBP07195 334 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 UBA7P41226 1012 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 CCDC178Q5BJE1 867 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 AMIGO3Q86WK7 504 aa15.5■□□□□ 0.07
PRPF40B-209ENST00000548825 SH3RF3Q8TEJ3 882 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms