RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 WRNIP1Q96S55 665 aa11.2□□□□□ -0.62
CDK2AP1-206ENST00000544658 ZKSCAN3Q9BRR0 538 aa11.2□□□□□ -0.62
CDK2AP1-206ENST00000544658 GBA2Q9HCG7 927 aaPredicted RBP11.2□□□□□ -0.62
CDK2AP1-206ENST00000544658 ZSWIM5Q9P217 1185 aa11.2□□□□□ -0.62
CDK2AP1-206ENST00000544658 HERC5Q9UII4 1024 aaKnown RBP11.2□□□□□ -0.62
CDK2AP1-206ENST00000544658 ST18O60284 1047 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 RANBP6O60518 1105 aaKnown RBP11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 KDM4AO75164 1064 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 TFAP4Q01664 338 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 FSTL1Q12841 308 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 CERKLQ49MI3 558 aaPredicted RBP11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 KIAA1755Q5JYT7 1200 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 MFSD6Q6ZSS7 791 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 ACER1Q8TDN7 264 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 C22orf23Q9BZE7 217 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 MKNK2Q9HBH9 465 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 ZBTB21Q9ULJ3 1066 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 PTPRFP10586 1907 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 MYH4Q9Y623 1939 aa11.19□□□□□ -0.62
CDK2AP1-206ENST00000544658 A0A1W2PRG0 241 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 EXOSC10Q01780 885 aaKnown RBP11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 ABCB5Q2M3G0 1257 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 RCSD1Q6JBY9 416 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 IL17RAQ96F46 866 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 JAKMIP1Q96N16 626 aaKnown RBP11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 TBC1D32Q96NH3 1257 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 ZIC5Q96T25 663 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 UPF3BQ9BZI7 483 aaKnown RBP11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 TOMM22Q9NS69 142 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 SWAP70Q9UH65 585 aa11.18□□□□□ -0.62
CDK2AP1-206ENST00000544658 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 CTNND1O60716 968 aaKnown RBP11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 PTPRAP18433 802 aa11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 ECE1P42892 770 aa11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 RBM25P49756 843 aaKnown RBP11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 PDE4BQ07343 736 aa11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 MKRN3Q13064 507 aaKnown RBP11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 NOL9Q5SY16 702 aaKnown RBP11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 AMOTL1Q8IY63 956 aa11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 SCYL3Q8IZE3 742 aa11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 CEP95Q96GE4 821 aa11.17□□□□□ -0.62
CDK2AP1-206ENST00000544658 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 IREB2P48200 963 aaKnown RBP11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 NOVP48745 357 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 HUNKP57058 714 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 RAB3GAP1Q15042 981 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 SEC23AQ15436 765 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 ZNF444Q8N0Y2 327 aaPredicted RBP11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 IGDCC4Q8TDY8 1250 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 NEK1Q96PY6 1258 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 TRIM34Q9BYJ4 488 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 PLIN4Q96Q06 1357 aa11.16□□□□□ -0.62
CDK2AP1-206ENST00000544658 TMEM88BA6NKF7 163 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 FAM155AB1AL88 458 aaPredicted RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 PRC1O43663 620 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 DTNBO60941 627 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 SLC3A2P08195 630 aaKnown RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 TSPY3P0CV98 308 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 TSPY8P0CW00 308 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 CASTP20810 708 aaKnown RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 RPS6KB1P23443 525 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 NF2P35240 595 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 APLP1P51693 650 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 MOGSQ13724 837 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 RAB11FIP4Q86YS3 637 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 ANKRD13AQ8IZ07 590 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 LRRC47Q8N1G4 583 aaKnown RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 NCOA7Q8NI08 942 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 TTC14Q96N46 770 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 MTMR4Q9NYA4 1195 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 AFG3L2Q9Y4W6 797 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 ZHX2Q9Y6X8 837 aa11.15□□□□□ -0.62
CDK2AP1-206ENST00000544658 TSPY2A6NKD2 308 aa11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 IRF6O14896 467 aa11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 HSPA6P17066 643 aa11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 SPP2Q13103 211 aa11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 TOB2Q14106 344 aaPredicted RBP11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 RNF20Q5VTR2 975 aa11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 CYP4F22Q6NT55 531 aa11.14□□□□□ -0.63
CDK2AP1-206ENST00000544658 TMEM179Q6ZVK1 233 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms