RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 HHIPL1Q96JK4 782 aa11.86□□□□□ -0.51
MDH1-216ENST00000544381 CRNKL1Q9BZJ0 848 aaKnown RBP11.86□□□□□ -0.51
MDH1-216ENST00000544381 SH2B1Q9NRF2 756 aaPredicted RBP11.86□□□□□ -0.51
MDH1-216ENST00000544381 FAM205AQ6ZU69 1335 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 LAMA4Q16363 1823 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 BAG3O95817 575 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
MDH1-216ENST00000544381 GTF2IP78347 998 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 CUL4AQ13619 759 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 TJAP1Q5JTD0 557 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 CIAPIN1Q6FI81 312 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 NCOA7Q8NI08 942 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 ZNF384Q8TF68 577 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
MDH1-216ENST00000544381 TCEANC2Q96MN5 208 aa11.85□□□□□ -0.51
MDH1-216ENST00000544381 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
MDH1-216ENST00000544381 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
MDH1-216ENST00000544381 HTTP42858 3142 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 FAM155AB1AL88 458 aaPredicted RBP11.84□□□□□ -0.51
MDH1-216ENST00000544381 EGFRP00533 1210 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 Q6ZUG5 572 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 PODNQ7Z5L7 613 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 MTRQ99707 1265 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 EPB41L4AQ9HCS5 686 aaPredicted RBP11.84□□□□□ -0.51
MDH1-216ENST00000544381 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
MDH1-216ENST00000544381 MKI67P46013 3256 aaKnown RBP11.83□□□□□ -0.52
MDH1-216ENST00000544381 MCM5P33992 734 aa11.83□□□□□ -0.52
MDH1-216ENST00000544381 DDIT3P35638 169 aa11.83□□□□□ -0.52
MDH1-216ENST00000544381 EXOSC10Q01780 885 aaKnown RBP11.83□□□□□ -0.52
MDH1-216ENST00000544381 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
MDH1-216ENST00000544381 METTL3Q86U44 580 aaKnown RBP11.83□□□□□ -0.52
MDH1-216ENST00000544381 CERS3Q8IU89 383 aa11.83□□□□□ -0.52
MDH1-216ENST00000544381 SDR42E1Q8WUS8 393 aa11.83□□□□□ -0.52
MDH1-216ENST00000544381 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
MDH1-216ENST00000544381 MYH2Q9UKX2 1941 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 ZNF646O15015 1829 aaPredicted RBP11.82□□□□□ -0.52
MDH1-216ENST00000544381 PSME4Q14997 1843 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 MINDY4BA8MYZ0 360 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 CA12O43570 354 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 RAD17O75943 681 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 RGS20O76081 388 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 CTDSPL2Q05D32 466 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
MDH1-216ENST00000544381 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 GRIK5Q16478 980 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 BEGAINQ9BUH8 593 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 KRT23Q9C075 422 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 VPS33BQ9H267 617 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 RNF41Q9H4P4 317 aaPredicted RBP11.82□□□□□ -0.52
MDH1-216ENST00000544381 CNNM2Q9H8M5 875 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 IL21Q9HBE4 155 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 ATP8A2Q9NTI2 1148 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 TPCN1Q9ULQ1 816 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 MROH7-TTC4A0A0A0MT08 1334 aa11.82□□□□□ -0.52
MDH1-216ENST00000544381 PRC1O43663 620 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 ECE2O60344 883 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 USP5P45974 858 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 NUCB2P80303 420 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 PPARAQ07869 468 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 DGKZQ13574 1117 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
MDH1-216ENST00000544381 ME3Q16798 604 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 AKNAD1Q5T1N1 836 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 MB21D2Q8IYB1 491 aaPredicted RBP11.81□□□□□ -0.52
MDH1-216ENST00000544381 ZC3H15Q8WU90 426 aaKnown RBP11.81□□□□□ -0.52
MDH1-216ENST00000544381 BRF1Q92994 677 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 PRR14Q9BWN1 585 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 TOMM22Q9NS69 142 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 WDR19Q8NEZ3 1342 aa11.81□□□□□ -0.52
MDH1-216ENST00000544381 B4E1Z4 1266 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 LARGE1O95461 756 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 SLC3A2P08195 630 aaKnown RBP11.8□□□□□ -0.52
MDH1-216ENST00000544381 BTDP43251 543 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 CCDC83Q8IWF9 413 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 AMOTL1Q8IY63 956 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 ZNF408Q9H9D4 720 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 DCP1AQ9NPI6 582 aaPredicted RBP11.8□□□□□ -0.52
MDH1-216ENST00000544381 ANAPC4Q9UJX5 808 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 SMC3Q9UQE7 1217 aa11.8□□□□□ -0.52
MDH1-216ENST00000544381 BAZ2AQ9UIF9 1905 aaKnown RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 GPR75-ASB3A0A0A6YYF3 556 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 USP17L3A6NCW0 530 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 USP17L4A6NCW7 530 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 USP17L12C9JPN9 530 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 USP17L21D6R901 530 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 F8W031 263 aaPredicted RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 FKBP1AP62942 108 aaKnown RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 STK3Q13188 491 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 RRP12Q5JTH9 1297 aaKnown RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 STRIP1Q5VSL9 837 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 CDC37L1Q7L3B6 337 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms