RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 PRDM1O75626 825 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 BMP6P22004 513 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 MLKLQ8NB16 471 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 SPATA20Q8TB22 786 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 BRMS1Q9HCU9 246 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 SERTAD1Q9UHV2 236 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 DACH1Q9UI36 760 aa20.3■□□□□ 0.84
SCARB1-208ENST00000544327 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
SCARB1-208ENST00000544327 V9GY48 417 aaPredicted RBP20.3■□□□□ 0.84
SCARB1-208ENST00000544327 PRDX5P30044 214 aa20.29■□□□□ 0.84
SCARB1-208ENST00000544327 MORC3Q14149 939 aa20.29■□□□□ 0.84
SCARB1-208ENST00000544327 NPY5RQ15761 445 aa20.29■□□□□ 0.84
SCARB1-208ENST00000544327 SPECC1Q5M775 1068 aa20.29■□□□□ 0.84
SCARB1-208ENST00000544327 CEP135Q66GS9 1140 aa20.29■□□□□ 0.84
SCARB1-208ENST00000544327 ARHGEF1Q92888 912 aaKnown RBP20.29■□□□□ 0.84
SCARB1-208ENST00000544327 FERMT2Q96AC1 680 aa20.29■□□□□ 0.84
SCARB1-208ENST00000544327 CSRNP2Q9H175 543 aa20.29■□□□□ 0.84
SCARB1-208ENST00000544327 USP27XA6NNY8 438 aa20.28■□□□□ 0.84
SCARB1-208ENST00000544327 KIF2AO00139 706 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-208ENST00000544327 FOXN1O15353 648 aa20.28■□□□□ 0.84
SCARB1-208ENST00000544327 ATP1A3P13637 1013 aa20.28■□□□□ 0.84
SCARB1-208ENST00000544327 SFPQP23246 707 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCARB1-208ENST00000544327 PDE4BQ07343 736 aa20.28■□□□□ 0.84
SCARB1-208ENST00000544327 CT47A1Q5JQC4 288 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-208ENST00000544327 CTCFLQ8NI51 663 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-208ENST00000544327 LEMD3Q9Y2U8 911 aa20.28■□□□□ 0.84
SCARB1-208ENST00000544327 PSDA5PKW4 1024 aaPredicted RBP20.27■□□□□ 0.84
SCARB1-208ENST00000544327 PTPN14Q15678 1187 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 ANKS1AQ92625 1134 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 SMARCE1Q969G3 411 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 MKRN1Q9UHC7 482 aaKnown RBP20.27■□□□□ 0.84
SCARB1-208ENST00000544327 ROBO3Q96MS0 1386 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 NRDCO43847 1150 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 UBASH3AP57075 661 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
SCARB1-208ENST00000544327 SRBD1Q8N5C6 995 aaKnown RBP20.27■□□□□ 0.84
SCARB1-208ENST00000544327 WDR66Q8TBY9 1149 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 ENOX1Q8TC92 643 aaKnown RBP20.27■□□□□ 0.84
SCARB1-208ENST00000544327 ANKRD7Q92527 254 aa20.27■□□□□ 0.84
SCARB1-208ENST00000544327 FAM205CA6NFA0 338 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 PRR29P0C7W0 189 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 TRAPPC10P48553 1259 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 GRAPQ13588 217 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 EARS2Q5JPH6 523 aaKnown RBP20.26■□□□□ 0.83
SCARB1-208ENST00000544327 TXNRD3Q86VQ6 643 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 VSTM4Q8IW00 320 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 GRAPLQ8TC17 118 aaPredicted RBP20.26■□□□□ 0.83
SCARB1-208ENST00000544327 TSC1Q92574 1164 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 CCDC34Q96HJ3 373 aa20.26■□□□□ 0.83
SCARB1-208ENST00000544327 SERPINC1P01008 464 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 CYP2D6P10635 497 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 SH3RF1Q7Z6J0 888 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 AMIGO3Q86WK7 504 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 DZIP1Q86YF9 867 aaKnown RBP20.25■□□□□ 0.83
SCARB1-208ENST00000544327 DPF2Q92785 391 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 FANCLQ9NW38 375 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 TUBB4AP04350 444 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 ZNF18P17022 549 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 EVX2Q03828 476 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 PFKFB3Q16875 520 aaPredicted RBP20.25■□□□□ 0.83
SCARB1-208ENST00000544327 E4F1Q66K89 784 aaPredicted RBP20.25■□□□□ 0.83
SCARB1-208ENST00000544327 RCSD1Q6JBY9 416 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 CCDC112Q8NEF3 446 aa20.25■□□□□ 0.83
SCARB1-208ENST00000544327 SLFN14P0C7P3 912 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 SCG2P13521 617 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 ERCC5P28715 1186 aaPredicted RBP20.24■□□□□ 0.83
SCARB1-208ENST00000544327 KIF5BP33176 963 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 GSTO1P78417 241 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 ATP2C1P98194 919 aaPredicted RBP20.24■□□□□ 0.83
SCARB1-208ENST00000544327 CCDC178Q5BJE1 867 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 C12orf60Q5U649 245 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 USP49Q70CQ1 688 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 TMX1Q9H3N1 280 aa20.24■□□□□ 0.83
SCARB1-208ENST00000544327 NMT2O60551 498 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 ATP2B1P20020 1258 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 PPP4CP60510 307 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 GLIPR1L2Q4G1C9 344 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 FAM47AQ5JRC9 791 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 TTC38Q5R3I4 469 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 NAV1Q8NEY1 1877 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 TSPY2A6NKD2 308 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 LDHBP07195 334 aaKnown RBP20.23■□□□□ 0.83
SCARB1-208ENST00000544327 PLCD1P51178 756 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 CFAP100Q494V2 611 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 SH3GLB2Q9NR46 395 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 MCM9Q9NXL9 1143 aa20.23■□□□□ 0.83
SCARB1-208ENST00000544327 XDHP47989 1333 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 hCG_1642624A0A1W2PR95 340 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 CCP110O43303 1012 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 FMR1Q06787 632 aaKnown RBP eCLIP20.22■□□□□ 0.83
SCARB1-208ENST00000544327 TRAPPC3LQ5T215 181 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 CERS3Q8IU89 383 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 CCDC24Q8N4L8 307 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 TCP11L1Q9NUJ3 509 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 INTS13Q9NVM9 706 aa20.22■□□□□ 0.83
SCARB1-208ENST00000544327 A0A087X0B3 334 aa20.21■□□□□ 0.83
SCARB1-208ENST00000544327 WNT7AO00755 349 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms