RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 PTPRFP10586 1907 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 GPAA1O43292 621 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 PRKAB2O43741 272 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 CDK8P49336 464 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 PDE1AP54750 535 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 UBXN2AP68543 259 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 CTR9Q6PD62 1173 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 LPAR1Q92633 364 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 SUPT16HQ9Y5B9 1047 aaKnown RBP12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 MYH7P12883 1935 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
NPIPB4-217ENST00000543449 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 APPP05067 770 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 GRK4P32298 578 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 TDO2P48775 406 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 SOX10P56693 466 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 HERVK_113P62684 666 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 CCNA1P78396 465 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 JAG1P78504 1218 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 IRF5Q13568 498 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 ZMYM1Q5SVZ6 1142 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 CCAR1Q8IX12 1150 aaKnown RBP12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 GPRC5AQ8NFJ5 357 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 EXOC6Q8TAG9 804 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 ZNF333Q96JL9 665 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 ARHGAP39Q9C0H5 1083 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 EMILIN3Q9NT22 766 aa12.29□□□□□ -0.44
NPIPB4-217ENST00000543449 GSG1L2A8MUP6 293 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 MAPK4P31152 587 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 ICA1Q05084 483 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 SEPT2Q15019 361 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 CHD1LQ86WJ1 897 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 HELLSQ9NRZ9 838 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 HOXC10Q9NYD6 342 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 ROBO3Q96MS0 1386 aa12.28□□□□□ -0.44
NPIPB4-217ENST00000543449 CYP2D6P10635 497 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 VCAM1P19320 739 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 GUCY1A2P33402 732 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 NUCB1Q02818 461 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 PRKCZQ05513 592 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 PDE4BQ07343 736 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 CATSPERGQ6ZRH7 1159 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 OTUD7AQ8TE49 926 aaPredicted RBP12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 DYNLL2Q96FJ2 89 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 NAPBQ9H115 298 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 TMX2Q9Y320 296 aa12.27□□□□□ -0.45
NPIPB4-217ENST00000543449 MINDY4BA8MYZ0 360 aa12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 HIP1O00291 1037 aa12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 AKR1B1P15121 316 aa12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 CAP1Q01518 475 aa12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 COG2Q14746 738 aa12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 ZYXQ15942 572 aaKnown RBP12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 IFNL3Q8IZI9 196 aa12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 SLC44A5Q8NCS7 719 aa12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 BIN2Q9UBW5 565 aaPredicted RBP12.26□□□□□ -0.45
NPIPB4-217ENST00000543449 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 M0R2C6 588 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 WDR46O15213 610 aaKnown RBP12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 ADCY3O60266 1144 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 CHGBP05060 677 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 CTGFP29279 349 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 FLT3LGP49771 235 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 NT5C2P49902 561 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 ERVK-24P63145 666 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 SHROOM1Q2M3G4 852 aaPredicted RBP12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 ACER1Q8TDN7 264 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 RPAP3Q9H6T3 665 aaPredicted RBP12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
NPIPB4-217ENST00000543449 CYP2D7A0A087X1C5 515 aa12.24□□□□□ -0.45
NPIPB4-217ENST00000543449 XRCC5P13010 732 aaKnown RBP12.24□□□□□ -0.45
NPIPB4-217ENST00000543449 B4GALNT3Q6L9W6 998 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms