RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SLC10A4Q96EP9 437 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 WRNIP1Q96S55 665 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 ZSCAN10Q96SZ4 725 aaPredicted RBP6.92□□□□□ -1.3
ABCF1-207ENST00000542772 TRIM34Q9BYJ4 488 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 ZBTB21Q9ULJ3 1066 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 TMX2Q9Y320 296 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 SNCAIPQ9Y6H5 919 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 TLL2Q9Y6L7 1015 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 PHIPQ8WWQ0 1821 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 A0A1W2PRG0 241 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 C19orf81C9J6K1 198 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 CXCL11O14625 94 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 PRC1O43663 620 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 GDF11O95390 407 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 TTLL1O95922 423 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 EEF2P13639 858 aaKnown RBP6.91□□□□□ -1.3
ABCF1-207ENST00000542772 CASTP20810 708 aaKnown RBP6.91□□□□□ -1.3
ABCF1-207ENST00000542772 APLP1P51693 650 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 PRKG1Q13976 671 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 VGLL4Q14135 290 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 SHROOM1Q2M3G4 852 aaPredicted RBP6.91□□□□□ -1.3
ABCF1-207ENST00000542772 RRP12Q5JTH9 1297 aaKnown RBP6.91□□□□□ -1.3
ABCF1-207ENST00000542772 RALYLQ86SE5 291 aaKnown RBP6.91□□□□□ -1.3
ABCF1-207ENST00000542772 ENAHQ8N8S7 591 aaPredicted RBP6.91□□□□□ -1.3
ABCF1-207ENST00000542772 CEP95Q96GE4 821 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 JAKMIP1Q96N16 626 aaKnown RBP6.91□□□□□ -1.3
ABCF1-207ENST00000542772 MAP3K14Q99558 947 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 CREBZFQ9NS37 354 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 KCNH4Q9UQ05 1017 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 CYP46A1Q9Y6A2 500 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 ATAD5Q96QE3 1844 aa6.91□□□□□ -1.3
ABCF1-207ENST00000542772 DOCK1Q14185 1865 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 TESPA1A2RU30 521 aaPredicted RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 RASSF10A6NK89 507 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 MPHOSPH10O00566 681 aaKnown RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 SH2B2O14492 632 aaPredicted RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 IFIT3O14879 490 aaKnown RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 NMT2O60551 498 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 SNHG28P0DPA3 235 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 TOP1P11387 765 aaKnown RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 CPA1P15085 419 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 NEK4P51957 841 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 BACE1P56817 501 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 TROAPQ12815 778 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 SPP2Q13103 211 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 PPIL2Q13356 520 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 TOB2Q14106 344 aaPredicted RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 TTLL12Q14166 644 aaPredicted RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 RABEP1Q15276 862 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 RGMBQ6NW40 437 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 Q6ZUG5 572 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 CHST3Q7LGC8 479 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 ZNF280CQ8ND82 737 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 CCDC102AQ96A19 550 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 ZNF274Q96GC6 653 aaPredicted RBP6.9□□□□□ -1.3
ABCF1-207ENST00000542772 CLMNQ96JQ2 1002 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 MS4A4AQ96JQ5 239 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 C12orf42Q96LP6 360 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 TMEM47Q9BQJ4 181 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 KIAA1683Q9H0B3 1180 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 LY9Q9HBG7 655 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 AS3MTQ9HBK9 375 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 PICK1Q9NRD5 415 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 CLIP2Q9UDT6 1046 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 CSADQ9Y600 493 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 ZHX2Q9Y6X8 837 aa6.9□□□□□ -1.3
ABCF1-207ENST00000542772 ERICH2A1L162 156 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 FAM155AB1AL88 458 aaPredicted RBP6.89□□□□□ -1.31
ABCF1-207ENST00000542772 F5H6K3 240 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 IRF6O14896 467 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 PLA2G6O60733 806 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 SMARCA1P28370 1054 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 GJA5P36382 358 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 ECE1P42892 770 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 RCAN1P53805 252 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 HUNKP57058 714 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 INHBEP58166 350 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 KLRC3Q07444 240 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 MOGSQ13724 837 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 WTAPQ15007 396 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 SART3Q15020 963 aaKnown RBP6.89□□□□□ -1.31
ABCF1-207ENST00000542772 RAB3GAP1Q15042 981 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 PPP2R5BQ15173 497 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 ANKRD1Q15327 319 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 DEFB115Q30KQ5 88 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 SPRYD7Q5W111 196 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 GMCL1P1Q8NEA9 526 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 ACER1Q8TDN7 264 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 UBAC1Q9BSL1 405 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 UPF3BQ9BZI7 483 aaKnown RBP6.89□□□□□ -1.31
ABCF1-207ENST00000542772 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 SENP2Q9HC62 589 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 ARHGEF10LQ9HCE6 1279 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 GPHNQ9NQX3 736 aaPredicted RBP6.89□□□□□ -1.31
ABCF1-207ENST00000542772 EMILIN3Q9NT22 766 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms