RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SH2B2O14492 632 aaPredicted RBP9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 ATP8B1O43520 1251 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 LIFRP42702 1097 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 CLCN6P51797 869 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 EXOSC10Q01780 885 aaKnown RBP9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 ARID5AQ03989 594 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 NR5A1Q13285 461 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 NEK11Q8NG66 645 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 FUCA2Q9BTY2 467 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 NUP58Q9BVL2 599 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 CSRNP2Q9H175 543 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 JAG2Q9Y219 1238 aa9.22□□□□□ -0.93
PRKAB1-207ENST00000542698 PTGDRQ13258 359 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 ZSCAN26Q16670 478 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 KCNB2Q92953 911 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 RRP36Q96EU6 259 aaKnown RBP9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 RASSF4Q9H2L5 321 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 FMNL1O95466 1100 aaPredicted RBP9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 IFI16Q16666 785 aaKnown RBP9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 RABL6Q3YEC7 729 aaPredicted RBP9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 TPTE2Q6XPS3 522 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 JAKMIP2Q96AA8 810 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 CDC23Q9UJX2 597 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 MAP3K15Q6ZN16 1313 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 RFX7Q2KHR2 1363 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 HEG1Q9ULI3 1381 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 PTPRUQ92729 1446 aa9.21□□□□□ -0.93
PRKAB1-207ENST00000542698 MMP1P03956 469 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 SV2BQ7L1I2 683 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 DHX40Q8IX18 779 aaKnown RBP9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 FAM76AQ8TAV0 307 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 SAMSN1Q9NSI8 373 aaKnown RBP9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 AATFQ9NY61 560 aaKnown RBP eCLIP9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 MAN1B1Q9UKM7 699 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 ASAP1Q9ULH1 1129 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 SAR1BQ9Y6B6 198 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 PXDNLA1KZ92 1463 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 H7C1D1 291 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 LDHBP07195 334 aaKnown RBP9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 HIBADHP31937 336 aaKnown RBP9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 CASP14P31944 242 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 TERF2Q15554 542 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 WHAMMP3Q1A5X7 153 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 KMT5BQ4FZB7 885 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 GRAMD1CQ8IYS0 662 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 ZSCAN10Q96SZ4 725 aaPredicted RBP9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 BPIFA3Q9BQP9 254 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 RNF26Q9BY78 433 aaPredicted RBP9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 TSGA10Q9BZW7 698 aa9.21□□□□□ -0.94
PRKAB1-207ENST00000542698 KCNJ18B7U540 433 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 PRPF4BQ13523 1007 aaKnown RBP9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 KCNJ12Q14500 433 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 DNAJC21Q5F1R6 531 aaKnown RBP9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 SRGAP1Q7Z6B7 1085 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 SEC31AO94979 1220 aaKnown RBP9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 MORC3Q14149 939 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 EPN1Q9Y6I3 576 aaPredicted RBP9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 CEMIPQ8WUJ3 1361 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 PNMA6AP0CW24 399 aaPredicted RBP9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 FAM47AQ5JRC9 791 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 CNNM4Q6P4Q7 775 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 AFAP1L1Q8TED9 768 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 IFT81Q8WYA0 676 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 SELENOOQ9BVL4 669 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 ANKRD2Q9GZV1 360 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 HAUS4Q9H6D7 363 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 GOPCQ9HD26 462 aa9.2□□□□□ -0.94
PRKAB1-207ENST00000542698 GOLGA6L7A0A1B0GV03 622 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 CCDC151A5D8V7 595 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 TRAF5O00463 557 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 ZEB2O60315 1214 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 MCAMP43121 646 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 TNNI2P48788 182 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 TFAP4Q01664 338 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 LONRF2Q1L5Z9 754 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 MEX3CQ5U5Q3 659 aaKnown RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 MB21D2Q8IYB1 491 aaPredicted RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 ATRIPQ8WXE1 791 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 CCDC113Q9H0I3 377 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 PCDHB6Q9Y5E3 794 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 SRPRBQ9Y5M8 271 aaKnown RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 CTIFO43310 598 aaKnown RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 PTPREP23469 700 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 ARID4AP29374 1257 aaPredicted RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 MNAT1P51948 309 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 TTLL11Q8NHH1 800 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 SECISBP2LQ93073 1101 aaKnown RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 RPGRIP1Q96KN7 1286 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 PARD6BQ9BYG5 372 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 TMEM131LA2VDJ0 1609 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 AP5Z1O43299 807 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 PRKAB2O43741 272 aa9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 GTPBP6O43824 516 aaPredicted RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
PRKAB1-207ENST00000542698 TXKP42681 527 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms