RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 CPA4Q9UI42 421 aa27.49■■□□□ 1.99
CLTA-210ENST00000540080 SLC45A1Q9Y2W3 748 aa27.49■■□□□ 1.99
CLTA-210ENST00000540080 ROBO3Q96MS0 1386 aa27.48■■□□□ 1.99
CLTA-210ENST00000540080 HSPD1P10809 573 aaKnown RBP27.48■■□□□ 1.99
CLTA-210ENST00000540080 MFAP1P55081 439 aaKnown RBP27.48■■□□□ 1.99
CLTA-210ENST00000540080 EMILIN3Q9NT22 766 aa27.48■■□□□ 1.99
CLTA-210ENST00000540080 PRDM1O75626 825 aa27.47■■□□□ 1.99
CLTA-210ENST00000540080 SLC3A2P08195 630 aaKnown RBP27.47■■□□□ 1.99
CLTA-210ENST00000540080 RASA1P20936 1047 aa27.47■■□□□ 1.99
CLTA-210ENST00000540080 USP17L2Q6R6M4 530 aa27.47■■□□□ 1.99
CLTA-210ENST00000540080 CLEC10AQ8IUN9 316 aa27.47■■□□□ 1.99
CLTA-210ENST00000540080 MYH8P13535 1937 aa27.46■■□□□ 1.99
CLTA-210ENST00000540080 FGAP02671 866 aa27.46■■□□□ 1.99
CLTA-210ENST00000540080 ALX1Q15699 326 aa27.46■■□□□ 1.99
CLTA-210ENST00000540080 CTU1Q7Z7A3 348 aaKnown RBP27.46■■□□□ 1.99
CLTA-210ENST00000540080 CD99L2Q8TCZ2 262 aa27.46■■□□□ 1.99
CLTA-210ENST00000540080 ZNF287Q9HBT7 754 aa27.46■■□□□ 1.99
CLTA-210ENST00000540080 CTDSPL2Q05D32 466 aa27.45■■□□□ 1.98
CLTA-210ENST00000540080 PABPC4Q13310 644 aaKnown RBP eCLIP27.45■■□□□ 1.982e-7■■■■□ 20.2
CLTA-210ENST00000540080 C17orf99Q6UX52 265 aa27.45■■□□□ 1.98
CLTA-210ENST00000540080 ZNF444Q8N0Y2 327 aaPredicted RBP27.45■■□□□ 1.98
CLTA-210ENST00000540080 SMCR8Q8TEV9 937 aaPredicted RBP27.45■■□□□ 1.98
CLTA-210ENST00000540080 ERO1AQ96HE7 468 aa27.45■■□□□ 1.98
CLTA-210ENST00000540080 KIAA1683Q9H0B3 1180 aa27.45■■□□□ 1.98
CLTA-210ENST00000540080 ADGRA2Q96PE1 1338 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 A0A1W2PRG0 241 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 OSBPP22059 807 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 USP14P54578 494 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 ICA1Q05084 483 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 PDE4BQ07343 736 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 SIAH1Q8IUQ4 282 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 MCOLN1Q9GZU1 580 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 PNMA3Q9UL41 463 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 LOC285556D6RIA3 1793 aa27.44■■□□□ 1.98
CLTA-210ENST00000540080 ECM2O94769 699 aaPredicted RBP27.43■■□□□ 1.98
CLTA-210ENST00000540080 ATP2B2Q01814 1243 aa27.43■■□□□ 1.98
CLTA-210ENST00000540080 ASCC2Q9H1I8 757 aaPredicted RBP27.43■■□□□ 1.98
CLTA-210ENST00000540080 KANSL2Q9H9L4 492 aa27.43■■□□□ 1.98
CLTA-210ENST00000540080 CHMLP26374 656 aa27.42■■□□□ 1.98
CLTA-210ENST00000540080 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.42■■□□□ 1.98
CLTA-210ENST00000540080 ARHGEF10LQ9HCE6 1279 aa27.42■■□□□ 1.98
CLTA-210ENST00000540080 INCENPQ9NQS7 918 aa27.42■■□□□ 1.98
CLTA-210ENST00000540080 EEF2P13639 858 aaKnown RBP27.41■■□□□ 1.98
CLTA-210ENST00000540080 IRX3P78415 501 aaPredicted RBP27.41■■□□□ 1.98
CLTA-210ENST00000540080 CAP1Q01518 475 aa27.41■■□□□ 1.98
CLTA-210ENST00000540080 C12orf42Q96LP6 360 aa27.41■■□□□ 1.98
CLTA-210ENST00000540080 IL25Q9H293 177 aa27.41■■□□□ 1.98
CLTA-210ENST00000540080 ANAPC4Q9UJX5 808 aa27.41■■□□□ 1.98
CLTA-210ENST00000540080 TRIM17Q9Y577 477 aa27.41■■□□□ 1.98
CLTA-210ENST00000540080 HOXA7P31268 230 aaPredicted RBP27.4■■□□□ 1.98
CLTA-210ENST00000540080 FAM47AQ5JRC9 791 aa27.4■■□□□ 1.98
CLTA-210ENST00000540080 BCRP11274 1271 aa27.39■■□□□ 1.98
CLTA-210ENST00000540080 HAND2P61296 217 aa27.39■■□□□ 1.98
CLTA-210ENST00000540080 LACTBP83111 547 aaPredicted RBP27.39■■□□□ 1.98
CLTA-210ENST00000540080 KIF22Q14807 665 aa27.39■■□□□ 1.98
CLTA-210ENST00000540080 RUFY2Q8WXA3 655 aa27.39■■□□□ 1.98
CLTA-210ENST00000540080 P2RX7Q99572 595 aaKnown RBP27.39■■□□□ 1.98
CLTA-210ENST00000540080 ARHGAP39Q9C0H5 1083 aa27.39■■□□□ 1.98
CLTA-210ENST00000540080 TMX2Q9Y320 296 aa27.39■■□□□ 1.98
CLTA-210ENST00000540080 ZMYM6O95789 1325 aa27.39■■□□□ 1.97
CLTA-210ENST00000540080 VCAM1P19320 739 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 TFAP4Q01664 338 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 OTOP1Q7RTM1 612 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 ANKRD13CQ8N6S4 541 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 SH2D4AQ9H788 454 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 EFCC1Q9HA90 598 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 PPP4R2Q9NY27 417 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.38■■□□□ 1.97
CLTA-210ENST00000540080 TACC3Q9Y6A5 838 aa27.38■■□□□ 1.97
CLTA-210ENST00000540080 TSPY3P0CV98 308 aa27.37■■□□□ 1.97
CLTA-210ENST00000540080 TSPY8P0CW00 308 aa27.37■■□□□ 1.97
CLTA-210ENST00000540080 KIAA1755Q5JYT7 1200 aa27.37■■□□□ 1.97
CLTA-210ENST00000540080 ERICH6BQ5W0A0 696 aa27.37■■□□□ 1.97
CLTA-210ENST00000540080 RPAP3Q9H6T3 665 aaPredicted RBP27.37■■□□□ 1.97
CLTA-210ENST00000540080 USP17L15C9J2P7 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L13C9JLJ4 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L11C9JVI0 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L18D6R9N7 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L22D6RA61 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L17D6RBQ6 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L19D6RCP7 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L20D6RJB6 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 USP17L24Q0WX57 530 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 PKN2Q16513 984 aaKnown RBP27.36■■□□□ 1.97
CLTA-210ENST00000540080 SPICE1Q8N0Z3 855 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 ABHD8Q96I13 439 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 DSCC1Q9BVC3 393 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 TOMM22Q9NS69 142 aa27.36■■□□□ 1.97
CLTA-210ENST00000540080 GCLCP48506 637 aaPredicted RBP27.35■■□□□ 1.97
CLTA-210ENST00000540080 ARHGEF6Q15052 776 aa27.35■■□□□ 1.97
CLTA-210ENST00000540080 CATSPERGQ6ZRH7 1159 aa27.35■■□□□ 1.97
CLTA-210ENST00000540080 NEDD1Q8NHV4 660 aa27.35■■□□□ 1.97
CLTA-210ENST00000540080 VCPKMTQ9H867 229 aa27.35■■□□□ 1.97
CLTA-210ENST00000540080 CLIP2Q9UDT6 1046 aa27.35■■□□□ 1.97
CLTA-210ENST00000540080 RAD50Q92878 1312 aa27.35■■□□□ 1.97
CLTA-210ENST00000540080 IGKV6D-41A0A0C4DH26 115 aa27.34■■□□□ 1.97
CLTA-210ENST00000540080 ZNF213O14771 459 aa27.34■■□□□ 1.97
CLTA-210ENST00000540080 RAD21O60216 631 aa27.34■■□□□ 1.97
CLTA-210ENST00000540080 RANBP6O60518 1105 aaKnown RBP27.34■■□□□ 1.97
CLTA-210ENST00000540080 CTGFP29279 349 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms