RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 AS3MTQ9HBK9 375 aa12.82□□□□□ -0.36
HMGA2-209ENST00000539662 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
HMGA2-209ENST00000539662 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
HMGA2-209ENST00000539662 ARPP21Q9UBL0 812 aaPredicted RBP12.82□□□□□ -0.36
HMGA2-209ENST00000539662 ROBO3Q96MS0 1386 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 USP17L10C9JJH3 530 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 BCRP11274 1271 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 GNAT2P19087 354 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
HMGA2-209ENST00000539662 CABP5Q9NP86 173 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 SWAP70Q9UH65 585 aa12.81□□□□□ -0.36
HMGA2-209ENST00000539662 PPARAQ07869 468 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 PROCA1Q8NCQ7 364 aaPredicted RBP12.8□□□□□ -0.36
HMGA2-209ENST00000539662 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 P2RX7Q99572 595 aaKnown RBP12.8□□□□□ -0.36
HMGA2-209ENST00000539662 TBC1D2Q9BYX2 928 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 NAPBQ9H115 298 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 ASCC2Q9H1I8 757 aaPredicted RBP12.8□□□□□ -0.36
HMGA2-209ENST00000539662 GINM1Q9NU53 330 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 TRIM17Q9Y577 477 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 MGAMO43451 1857 aa12.8□□□□□ -0.36
HMGA2-209ENST00000539662 FGAP02671 866 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 HSPD1P10809 573 aaKnown RBP12.79□□□□□ -0.36
HMGA2-209ENST00000539662 LACTBP83111 547 aaPredicted RBP12.79□□□□□ -0.36
HMGA2-209ENST00000539662 FAM47AQ5JRC9 791 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 AMOTL1Q8IY63 956 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 PARK7Q99497 189 aaKnown RBP12.79□□□□□ -0.36
HMGA2-209ENST00000539662 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 CCDC171Q6TFL3 1326 aa12.79□□□□□ -0.36
HMGA2-209ENST00000539662 RLFQ13129 1914 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 CENPFP49454 3210 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 C19orf81C9J6K1 198 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
HMGA2-209ENST00000539662 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 TRIM47Q96LD4 638 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 FEZ1Q99689 392 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 KIAA1683Q9H0B3 1180 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 TXNRD2Q9NNW7 524 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 TMOD4Q9NZQ9 345 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 SLC45A1Q9Y2W3 748 aa12.78□□□□□ -0.36
HMGA2-209ENST00000539662 IGKV6D-41A0A0C4DH26 115 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 VCAM1P19320 739 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 HOXA7P31268 230 aaPredicted RBP12.77□□□□□ -0.37
HMGA2-209ENST00000539662 HAND2P61296 217 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 ICA1Q05084 483 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 ALX1Q15699 326 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.37
HMGA2-209ENST00000539662 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 ERO1AQ96HE7 468 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 C12orf42Q96LP6 360 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 CCDC17Q96LX7 622 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 EFCC1Q9HA90 598 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 MKNK2Q9HBH9 465 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 DIAPH3Q9NSV4 1193 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGA2-209ENST00000539662 DOCK3Q8IZD9 2030 aa12.77□□□□□ -0.37
HMGA2-209ENST00000539662 MYH4Q9Y623 1939 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 NMT2O60551 498 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 CHMLP26374 656 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 PSMC4P43686 418 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 Q3C1V9 767 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 SMCR8Q8TEV9 937 aaPredicted RBP12.76□□□□□ -0.37
HMGA2-209ENST00000539662 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
HMGA2-209ENST00000539662 RBPJLQ9UBG7 517 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 PTPN22Q9Y2R2 807 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 TMX2Q9Y320 296 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 PARP14Q460N5 1801 aa12.76□□□□□ -0.37
HMGA2-209ENST00000539662 CCDC85CA6NKD9 419 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 CNMDO75829 334 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 OSBPP22059 807 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 HERVK_113P62684 666 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 TFAP4Q01664 338 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 FBXO46Q6PJ61 603 aaPredicted RBP12.75□□□□□ -0.37
HMGA2-209ENST00000539662 CATSPERGQ6ZRH7 1159 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 TICAM2Q86XR7 235 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 TBC1D10CQ8IV04 446 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 CHMP4CQ96CF2 233 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 CEP95Q96GE4 821 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 CCDC136Q96JN2 1154 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 IL17RBQ9NRM6 502 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 ANAPC4Q9UJX5 808 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 PTCH2Q9Y6C5 1203 aa12.75□□□□□ -0.37
HMGA2-209ENST00000539662 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
HMGA2-209ENST00000539662 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
HMGA2-209ENST00000539662 USP14P54578 494 aa12.74□□□□□ -0.37
HMGA2-209ENST00000539662 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
HMGA2-209ENST00000539662 PTH1RQ03431 593 aa12.74□□□□□ -0.37
HMGA2-209ENST00000539662 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
HMGA2-209ENST00000539662 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms