RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 LZTS2Q9BRK4 669 aa23.56■■□□□ 1.36
CDH5-202ENST00000539168 GZF1Q9H116 711 aaPredicted RBP23.56■■□□□ 1.36
CDH5-202ENST00000539168 PI4KBQ9UBF8 816 aa23.56■■□□□ 1.36
CDH5-202ENST00000539168 ADAMTSL1Q8N6G6 1762 aa23.56■■□□□ 1.36
CDH5-202ENST00000539168 MYH15Q9Y2K3 1946 aa23.55■■□□□ 1.36
CDH5-202ENST00000539168 PPFIA3O75145 1194 aa23.55■■□□□ 1.36
CDH5-202ENST00000539168 NOVP48745 357 aa23.55■■□□□ 1.36
CDH5-202ENST00000539168 FOSBP53539 338 aa23.55■■□□□ 1.36
CDH5-202ENST00000539168 GUCY1B3Q02153 619 aa23.55■■□□□ 1.36
CDH5-202ENST00000539168 RAD17O75943 681 aa23.54■■□□□ 1.36
CDH5-202ENST00000539168 TOP1P11387 765 aaKnown RBP23.54■■□□□ 1.36
CDH5-202ENST00000539168 KIF23Q02241 960 aaPredicted RBP23.54■■□□□ 1.36
CDH5-202ENST00000539168 TNIP1Q15025 636 aa23.54■■□□□ 1.36
CDH5-202ENST00000539168 FOXP4Q8IVH2 680 aaPredicted RBP23.54■■□□□ 1.36
CDH5-202ENST00000539168 MTMR14Q8NCE2 650 aa23.54■■□□□ 1.36
CDH5-202ENST00000539168 STX8Q9UNK0 236 aa23.54■■□□□ 1.36
CDH5-202ENST00000539168 GOLGA6L4A6NEF3 574 aa23.54■■□□□ 1.36
CDH5-202ENST00000539168 GNL2Q13823 731 aaKnown RBP23.54■■□□□ 1.36
CDH5-202ENST00000539168 GRM4Q14833 912 aa23.54■■□□□ 1.36
CDH5-202ENST00000539168 CAVIN1Q6NZI2 390 aaKnown RBP23.54■■□□□ 1.36
CDH5-202ENST00000539168 LEO1Q8WVC0 666 aaPredicted RBP23.54■■□□□ 1.36
CDH5-202ENST00000539168 FUT2Q10981 343 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 NFIAQ12857 509 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 DLGAP5Q15398 846 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 CIAPIN1Q6FI81 312 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 FAM173BQ6P4H8 233 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 TMEM47Q9BQJ4 181 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 TRIM34Q9BYJ4 488 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 BCS1LQ9Y276 419 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 ATRNL1Q5VV63 1379 aa23.53■■□□□ 1.36
CDH5-202ENST00000539168 MYH8P13535 1937 aa23.52■■□□□ 1.36
CDH5-202ENST00000539168 SPDYE2BA6NHP3 402 aa23.52■■□□□ 1.36
CDH5-202ENST00000539168 SPDYE6P0CI01 402 aa23.52■■□□□ 1.36
CDH5-202ENST00000539168 FAM198AQ9UFP1 575 aa23.52■■□□□ 1.36
CDH5-202ENST00000539168 RCOR1Q9UKL0 485 aa23.52■■□□□ 1.36
CDH5-202ENST00000539168 PSDA5PKW4 1024 aaPredicted RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 GADD45BO75293 160 aaPredicted RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 FKBP1CQ5VVH2 108 aa23.51■■□□□ 1.35
CDH5-202ENST00000539168 FAM177A1Q8N128 213 aaPredicted RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 TFIP11Q9UBB9 837 aaKnown RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 COL4A5P29400 1685 aa23.51■■□□□ 1.35
CDH5-202ENST00000539168 LETM1O95202 739 aaPredicted RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 MMP1P03956 469 aa23.51■■□□□ 1.35
CDH5-202ENST00000539168 RPS12P25398 132 aaKnown RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 U2AF2P26368 475 aaKnown RBP eCLIP23.51■■□□□ 1.35
CDH5-202ENST00000539168 SMARCA1P28370 1054 aa23.51■■□□□ 1.35
CDH5-202ENST00000539168 DEKP35659 375 aaKnown RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 OTUD7BQ6GQQ9 843 aa23.51■■□□□ 1.35
CDH5-202ENST00000539168 PRMT6Q96LA8 375 aaPredicted RBP23.51■■□□□ 1.35
CDH5-202ENST00000539168 RTEL1Q9NZ71 1219 aa23.51■■□□□ 1.35
CDH5-202ENST00000539168 MYH6P13533 1939 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 NFKBIEO00221 500 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 ZNF445P59923 1031 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 CXCL9Q07325 125 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 L1TD1Q5T7N2 865 aaKnown RBP23.5■■□□□ 1.35
CDH5-202ENST00000539168 MYSM1Q5VVJ2 828 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 ZSCAN29Q8IWY8 852 aaPredicted RBP23.5■■□□□ 1.35
CDH5-202ENST00000539168 CEP95Q96GE4 821 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 AIFM3Q96NN9 605 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 FOXP1Q9H334 677 aaPredicted RBP23.5■■□□□ 1.35
CDH5-202ENST00000539168 TDRD3Q9H7E2 651 aaKnown RBP23.5■■□□□ 1.35
CDH5-202ENST00000539168 SPON1Q9HCB6 807 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 CNTNAP5Q8WYK1 1306 aa23.5■■□□□ 1.35
CDH5-202ENST00000539168 ARFGEF1Q9Y6D6 1849 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 IGKV6D-41A0A0C4DH26 115 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 MYO1BO43795 1136 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 PLEKHA8P1O95397 391 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 YEATS4O95619 227 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 SHMT1P34896 483 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 METTL16Q86W50 562 aaKnown RBP23.49■■□□□ 1.35
CDH5-202ENST00000539168 CCDC82Q8N4S0 544 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 POLR3EQ9NVU0 708 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 MTMR4Q9NYA4 1195 aa23.49■■□□□ 1.35
CDH5-202ENST00000539168 GOLGA6L3A6NEY3 463 aa23.48■■□□□ 1.35
CDH5-202ENST00000539168 BRMS1Q9HCU9 246 aa23.48■■□□□ 1.35
CDH5-202ENST00000539168 V9GY48 417 aaPredicted RBP23.48■■□□□ 1.35
CDH5-202ENST00000539168 TTLL1O95922 423 aa23.48■■□□□ 1.35
CDH5-202ENST00000539168 TCP10Q12799 353 aa23.48■■□□□ 1.35
CDH5-202ENST00000539168 ZSCAN23Q3MJ62 389 aa23.48■■□□□ 1.35
CDH5-202ENST00000539168 SRBD1Q8N5C6 995 aaKnown RBP23.48■■□□□ 1.35
CDH5-202ENST00000539168 KCNG4Q8TDN1 519 aa23.48■■□□□ 1.35
CDH5-202ENST00000539168 USP28Q96RU2 1077 aa23.48■■□□□ 1.35
CDH5-202ENST00000539168 PALM3A6NDB9 673 aaPredicted RBP23.47■■□□□ 1.35
CDH5-202ENST00000539168 AKR1B1P15121 316 aa23.47■■□□□ 1.35
CDH5-202ENST00000539168 GUCY1A2P33402 732 aa23.47■■□□□ 1.35
CDH5-202ENST00000539168 CCDC183Q5T5S1 534 aa23.47■■□□□ 1.35
CDH5-202ENST00000539168 CMTR1Q8N1G2 835 aaKnown RBP23.47■■□□□ 1.35
CDH5-202ENST00000539168 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.47■■□□□ 1.35
CDH5-202ENST00000539168 HERC5Q9UII4 1024 aaKnown RBP23.47■■□□□ 1.35
CDH5-202ENST00000539168 PCDHAC2Q9Y5I4 1007 aa23.47■■□□□ 1.35
CDH5-202ENST00000539168 PARP1P09874 1014 aaKnown RBP23.46■■□□□ 1.35
CDH5-202ENST00000539168 NASPP49321 788 aaPredicted RBP23.46■■□□□ 1.35
CDH5-202ENST00000539168 PKN1Q16512 942 aa23.46■■□□□ 1.35
CDH5-202ENST00000539168 SPDYE2Q495Y8 402 aa23.46■■□□□ 1.35
CDH5-202ENST00000539168 TATDN1Q6P1N9 297 aa23.46■■□□□ 1.35
CDH5-202ENST00000539168 FAM151AQ8WW52 585 aa23.46■■□□□ 1.35
CDH5-202ENST00000539168 SH3GLB2Q9NR46 395 aa23.46■■□□□ 1.35
CDH5-202ENST00000539168 TMEM63CQ9P1W3 806 aa23.46■■□□□ 1.35
CDH5-202ENST00000539168 MAD2L2Q9UI95 211 aa23.46■■□□□ 1.35
CDH5-202ENST00000539168 DDTLA6NHG4 134 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms