RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 ECM2O94769 699 aaPredicted RBP20.69■□□□□ 0.9
GPN3-202ENST00000537466 BCRP11274 1271 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 SDSP20132 328 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 LACTBP83111 547 aaPredicted RBP20.69■□□□□ 0.9
GPN3-202ENST00000537466 MCMDC2Q4G0Z9 681 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 TMEM179Q6ZVK1 233 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 CLEC10AQ8IUN9 316 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 FEZ1Q99689 392 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 NACAP1Q9BZK3 213 aa20.69■□□□□ 0.9
GPN3-202ENST00000537466 MYH4Q9Y623 1939 aa20.68■□□□□ 0.9
GPN3-202ENST00000537466 GSPT1P15170 499 aaKnown RBP20.68■□□□□ 0.9
GPN3-202ENST00000537466 PKN2Q16513 984 aaKnown RBP20.68■□□□□ 0.9
GPN3-202ENST00000537466 USP17L2Q6R6M4 530 aa20.68■□□□□ 0.9
GPN3-202ENST00000537466 ZNF589Q86UQ0 364 aaPredicted RBP20.68■□□□□ 0.9
GPN3-202ENST00000537466 NAPBQ9H115 298 aa20.68■□□□□ 0.9
GPN3-202ENST00000537466 PNMA3Q9UL41 463 aa20.68■□□□□ 0.9
GPN3-202ENST00000537466 A0A1W2PRG0 241 aa20.67■□□□□ 0.9
GPN3-202ENST00000537466 CTGFP29279 349 aa20.67■□□□□ 0.9
GPN3-202ENST00000537466 TTC22Q5TAA0 569 aa20.67■□□□□ 0.9
GPN3-202ENST00000537466 SMCR8Q8TEV9 937 aaPredicted RBP20.67■□□□□ 0.9
GPN3-202ENST00000537466 CCDC17Q96LX7 622 aa20.67■□□□□ 0.9
GPN3-202ENST00000537466 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
GPN3-202ENST00000537466 ASCC2Q9H1I8 757 aaPredicted RBP20.67■□□□□ 0.9
GPN3-202ENST00000537466 EFCC1Q9HA90 598 aa20.67■□□□□ 0.9
GPN3-202ENST00000537466 HTTP42858 3142 aa20.67■□□□□ 0.9
GPN3-202ENST00000537466 RASA1P20936 1047 aa20.66■□□□□ 0.9
GPN3-202ENST00000537466 PABPC4Q13310 644 aaKnown RBP eCLIP20.66■□□□□ 0.95e-7■□□□□ 10
GPN3-202ENST00000537466 FBXO46Q6PJ61 603 aaPredicted RBP20.66■□□□□ 0.9
GPN3-202ENST00000537466 SIAH1Q8IUQ4 282 aa20.66■□□□□ 0.9
GPN3-202ENST00000537466 C12orf42Q96LP6 360 aa20.66■□□□□ 0.9
GPN3-202ENST00000537466 DOCK3Q8IZD9 2030 aa20.65■□□□□ 0.9
GPN3-202ENST00000537466 PARP14Q460N5 1801 aa20.65■□□□□ 0.9
GPN3-202ENST00000537466 OSBPP22059 807 aa20.65■□□□□ 0.9
GPN3-202ENST00000537466 HOXA7P31268 230 aaPredicted RBP20.65■□□□□ 0.9
GPN3-202ENST00000537466 HPS5Q9UPZ3 1129 aa20.65■□□□□ 0.9
GPN3-202ENST00000537466 RLFQ13129 1914 aa20.65■□□□□ 0.9
GPN3-202ENST00000537466 CCDC171Q6TFL3 1326 aa20.65■□□□□ 0.9
GPN3-202ENST00000537466 PRDM1O75626 825 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 USP14P54578 494 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 ICA1Q05084 483 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 PPARAQ07869 468 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 KIF22Q14807 665 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 ANKRD13CQ8N6S4 541 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.64■□□□□ 0.89
GPN3-202ENST00000537466 MKNK2Q9HBH9 465 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 PTPN22Q9Y2R2 807 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 LAMA4Q16363 1823 aa20.64■□□□□ 0.89
GPN3-202ENST00000537466 CCDC85CA6NKD9 419 aa20.63■□□□□ 0.89
GPN3-202ENST00000537466 HSPD1P10809 573 aaKnown RBP20.63■□□□□ 0.89
GPN3-202ENST00000537466 IRX3P78415 501 aaPredicted RBP20.63■□□□□ 0.89
GPN3-202ENST00000537466 CWC27Q6UX04 472 aaKnown RBP20.63■□□□□ 0.89
GPN3-202ENST00000537466 P2RX7Q99572 595 aaKnown RBP20.63■□□□□ 0.89
GPN3-202ENST00000537466 VCAM1P19320 739 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 PSMC4P43686 418 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 KIAA1755Q5JYT7 1200 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 DIAPH3Q9NSV4 1193 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 PEX10O60683 326 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 EEF2P13639 858 aaKnown RBP20.62■□□□□ 0.89
GPN3-202ENST00000537466 CTDSPL2Q05D32 466 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 ALX1Q15699 326 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 ARHGEF10LQ9HCE6 1279 aa20.62■□□□□ 0.89
GPN3-202ENST00000537466 CENPFP49454 3210 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 FGAP02671 866 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 GCLCP48506 637 aaPredicted RBP20.61■□□□□ 0.89
GPN3-202ENST00000537466 HERVK_113P62684 666 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 ARHGEF6Q15052 776 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 FAM110CQ1W6H9 321 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 POTEEQ6S8J3 1075 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 CENPQQ7L2Z9 268 aaPredicted RBP20.61■□□□□ 0.89
GPN3-202ENST00000537466 SKAP1Q86WV1 359 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 KANSL2Q9H9L4 492 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 TMX2Q9Y320 296 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 TACC3Q9Y6A5 838 aa20.61■□□□□ 0.89
GPN3-202ENST00000537466 USP17L15C9J2P7 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L13C9JLJ4 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L11C9JVI0 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L18D6R9N7 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L22D6RA61 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L17D6RBQ6 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L19D6RCP7 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L20D6RJB6 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 HIP1O00291 1037 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 FMNL1O95466 1100 aaPredicted RBP20.6■□□□□ 0.89
GPN3-202ENST00000537466 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 USP17L24Q0WX57 530 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 ZNF444Q8N0Y2 327 aaPredicted RBP20.6■□□□□ 0.89
GPN3-202ENST00000537466 IL25Q9H293 177 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
GPN3-202ENST00000537466 ZNF287Q9HBT7 754 aa20.6■□□□□ 0.89
GPN3-202ENST00000537466 PLXNB2O15031 1838 aa20.59■□□□□ 0.89
GPN3-202ENST00000537466 COL11A1P12107 1806 aaPredicted RBP20.59■□□□□ 0.89
GPN3-202ENST00000537466 SLC3A2P08195 630 aaKnown RBP20.59■□□□□ 0.89
GPN3-202ENST00000537466 PDE4BQ07343 736 aa20.59■□□□□ 0.89
GPN3-202ENST00000537466 TXNRD2Q9NNW7 524 aa20.59■□□□□ 0.89
GPN3-202ENST00000537466 ANAPC4Q9UJX5 808 aa20.59■□□□□ 0.89
GPN3-202ENST00000537466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms