RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 DIS3L2Q8IYB7 885 aaKnown RBP20.45■□□□□ 0.86
RAB40C-203ENST00000535977 FBXW7Q969H0 707 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 RNF26Q9BY78 433 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-203ENST00000535977 EPC1Q9H2F5 836 aa20.45■□□□□ 0.86
RAB40C-203ENST00000535977 NCAPHQ15003 741 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 TTC31Q49AM3 519 aaPredicted RBP20.44■□□□□ 0.86
RAB40C-203ENST00000535977 MIGA1Q8NAN2 632 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 ADAM21Q9UKJ8 722 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 BIN1O00499 593 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 TADA3O75528 432 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 SMC2O95347 1197 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 SLC10A5Q5PT55 438 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 CNNM3Q8NE01 707 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 MNS1Q8NEH6 495 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 EXOC4Q96A65 974 aa20.44■□□□□ 0.86
RAB40C-203ENST00000535977 PRR29P0C7W0 189 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 PTPREP23469 700 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 AKAP17AQ02040 695 aaKnown RBP20.43■□□□□ 0.86
RAB40C-203ENST00000535977 CC2D1AQ6P1N0 951 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-203ENST00000535977 IQUBQ8NA54 791 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 XPO4Q9C0E2 1151 aaKnown RBP20.43■□□□□ 0.86
RAB40C-203ENST00000535977 IFNKQ9P0W0 207 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 ABCF2Q9UG63 623 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 BTBD18B2RXH4 712 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 CALM1P0DP23 149 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 CALM2P0DP24 149 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 CALM3P0DP25 149 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 ACTN2P35609 894 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 MYL5Q02045 173 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 KANK3Q6NY19 840 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 PSD3Q9NYI0 1048 aa20.43■□□□□ 0.86
RAB40C-203ENST00000535977 PDS5AQ29RF7 1337 aaKnown RBP20.43■□□□□ 0.86
RAB40C-203ENST00000535977 TUBB4AP04350 444 aa20.42■□□□□ 0.86
RAB40C-203ENST00000535977 SEC23AQ15436 765 aa20.42■□□□□ 0.86
RAB40C-203ENST00000535977 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
RAB40C-203ENST00000535977 PSDA5PKW4 1024 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-203ENST00000535977 MYCNP04198 464 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-203ENST00000535977 NOM1Q5C9Z4 860 aaKnown RBP20.42■□□□□ 0.86
RAB40C-203ENST00000535977 DNAI1Q9UI46 699 aa20.42■□□□□ 0.86
RAB40C-203ENST00000535977 HOMER1Q86YM7 354 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 GPATCH11Q8N954 259 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 NGLY1Q96IV0 654 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 ZKSCAN3Q9BRR0 538 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 RIOK1Q9BRS2 568 aaKnown RBP20.41■□□□□ 0.86
RAB40C-203ENST00000535977 MINDY4BA8MYZ0 360 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 FGRP09769 529 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 FANCCQ00597 558 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 CLIC6Q96NY7 704 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 CARD6Q9BX69 1037 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 NYXQ9GZU5 481 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 DACH1Q9UI36 760 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 MINPP1Q9UNW1 487 aa20.41■□□□□ 0.86
RAB40C-203ENST00000535977 GUCY1A2P33402 732 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 MAGEA9P43362 315 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 IQCA1Q86XH1 822 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 NUP133Q8WUM0 1156 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 SRPRBQ9Y5M8 271 aaKnown RBP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 TNKSO95271 1327 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 COL5A3P25940 1745 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 BMP15O95972 392 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 SFPQP23246 707 aaKnown RBP eCLIP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 GYG1P46976 350 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 TOB1P50616 345 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 LONRF3Q496Y0 759 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 CATIPQ7Z7H3 387 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 STK11IPQ8N1F8 1099 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 ZSCAN10Q96SZ4 725 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 CNTNAP4Q9C0A0 1308 aa20.4■□□□□ 0.86
RAB40C-203ENST00000535977 ETF1P62495 437 aaKnown RBP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 METTL16Q86W50 562 aaKnown RBP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 FBXO2Q9UK22 296 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-203ENST00000535977 EFCAB8A8MWE9 144 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 CLGNO14967 610 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 NT5C2P49902 561 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 PNOCQ13519 176 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 ARMCX5Q6P1M9 558 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 TMC6Q7Z403 805 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 TRIML1Q8N9V2 468 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 KCNJ14Q9UNX9 436 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 SPATA31A6Q5VVP1 1343 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 H3BQF6 201 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 CCP110O43303 1012 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 PRPF3O43395 683 aaKnown RBP20.39■□□□□ 0.85
RAB40C-203ENST00000535977 ATP2B1P20020 1258 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 MDM2Q00987 491 aaPredicted RBP20.39■□□□□ 0.85
RAB40C-203ENST00000535977 FBXO33Q7Z6M2 555 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 ADGRA1Q86SQ6 560 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 SDR42E1Q8WUS8 393 aa20.39■□□□□ 0.85
RAB40C-203ENST00000535977 FAM84BQ96KN1 310 aaPredicted RBP20.39■□□□□ 0.85
RAB40C-203ENST00000535977 PHLPP2Q6ZVD8 1323 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 URI1O94763 535 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-203ENST00000535977 TPM1P09493 284 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 NT5DC1Q5TFE4 455 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 ANKRD2Q9GZV1 360 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 PCDHA5Q9Y5H7 936 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 FANCGO15287 622 aa20.38■□□□□ 0.85
RAB40C-203ENST00000535977 CT47A1Q5JQC4 288 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-203ENST00000535977 IFIT1BQ5T764 474 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms