RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 C16orf59Q7L2K0 433 aa12.72□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 SRCIN1Q9C0H9 1055 aa12.72□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 CACNA1AO00555 2505 aa12.72□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 SALL1Q9NSC2 1324 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 MYH2Q9UKX2 1941 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 MYH13Q9UKX3 1938 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 C19orf81C9J6K1 198 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 APBB1O00213 710 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 HOXC6P09630 235 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 RHBDL3P58872 404 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 GRB14Q14449 540 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 SLF2Q8IX21 1173 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 GTF3C2Q8WUA4 911 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 DENND2AQ9ULE3 1009 aa12.71□□□□□ -0.37
NEDD8-MDP1-202ENST00000534348 MROH7-TTC4A0A0A0MT08 1334 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ATAD5Q96QE3 1844 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ALDH1L1O75891 902 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 PGK1P00558 417 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ASNSP08243 561 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 TMEM240Q5SV17 173 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 BTBD7Q9P203 1132 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 PHF24Q9UPV7 400 aa12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 YBX2Q9Y2T7 364 aaKnown RBP12.7□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 TRANK1O15050 2925 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 VAMP4O75379 141 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 TIMP1P01033 207 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 CSF2RAP15509 400 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ADORA2AP29274 412 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 MECOMQ03112 1051 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RAB30Q15771 203 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RABL6Q3YEC7 729 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ZGPATQ8N5A5 531 aaKnown RBP12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 SIL1Q9H173 461 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 XPNPEP3Q9NQH7 507 aa12.69□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 EYA2O00167 538 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RFXAPO00287 272 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ERC2O15083 957 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 TLL1O43897 1013 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RABGGTBP53611 331 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 NHLH1Q02575 133 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 MFSD5Q6N075 450 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L15C9J2P7 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L13C9JLJ4 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L11C9JVI0 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L18D6R9N7 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L22D6RA61 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L17D6RBQ6 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L19D6RCP7 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L20D6RJB6 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 COBLO75128 1261 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 IGHA2P01877 340 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RARBP10826 455 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 MYOGP15173 224 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ADORA1P30542 326 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 USP17L24Q0WX57 530 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 PPIGQ13427 754 aaKnown RBP eCLIP12.67□□□□□ -0.389e-7■■□□□ 11.9
NEDD8-MDP1-202ENST00000534348 PPP2R2DQ66LE6 453 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 OLFML2BQ68BL8 750 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RNF180Q86T96 592 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 LENG1Q96BZ8 264 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 FEZ1Q99689 392 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 CERS4Q9HA82 394 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 CD320Q9NPF0 282 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 SEMA3EO15041 775 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 KRT40Q6A162 431 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ERICH6Q7L0X2 663 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ZNF384Q8TF68 577 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 STARD7Q9NQZ5 370 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 ZBTB21Q9ULJ3 1066 aa12.66□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 FANCIQ9NVI1 1328 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 PI4K2BG5E9Z4 385 aa12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
NEDD8-MDP1-202ENST00000534348 CCDC102BQ68D86 513 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms