RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 DHX36Q9H2U1 1008 aaKnown RBP11.33□□□□□ -0.6
VPS26B-207ENST00000532160 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
VPS26B-207ENST00000532160 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 GOLIM4O00461 696 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 BAG3O95817 575 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 HMGCRP04035 888 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 PLCG2P16885 1265 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 DYNLL1P63167 89 aaKnown RBP11.32□□□□□ -0.6
VPS26B-207ENST00000532160 IRX3P78415 501 aaPredicted RBP11.32□□□□□ -0.6
VPS26B-207ENST00000532160 ZNF512BQ96KM6 892 aaPredicted RBP11.32□□□□□ -0.6
VPS26B-207ENST00000532160 P2RX7Q99572 595 aaKnown RBP11.32□□□□□ -0.6
VPS26B-207ENST00000532160 TXNRD2Q9NNW7 524 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 MORF4L1Q9UBU8 362 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 STAP2Q9UGK3 403 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
VPS26B-207ENST00000532160 TTC41PQ6P2S7 1318 aa11.32□□□□□ -0.6
VPS26B-207ENST00000532160 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
VPS26B-207ENST00000532160 EVI5O60447 810 aa11.31□□□□□ -0.6
VPS26B-207ENST00000532160 ASNSP08243 561 aa11.31□□□□□ -0.6
VPS26B-207ENST00000532160 CRACR2BQ8N4Y2 399 aaPredicted RBP11.31□□□□□ -0.6
VPS26B-207ENST00000532160 TRIB2Q92519 343 aa11.31□□□□□ -0.6
VPS26B-207ENST00000532160 HAUS7Q99871 368 aa11.31□□□□□ -0.6
VPS26B-207ENST00000532160 TMOD4Q9NZQ9 345 aa11.31□□□□□ -0.6
VPS26B-207ENST00000532160 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
VPS26B-207ENST00000532160 DNAH12Q6ZR08 3092 aa11.31□□□□□ -0.6
VPS26B-207ENST00000532160 ERC2O15083 957 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 GLRX3O76003 335 aaKnown RBP11.3□□□□□ -0.6
VPS26B-207ENST00000532160 CHGBP05060 677 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 CYP2B6P20813 491 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 HOXA7P31268 230 aaPredicted RBP11.3□□□□□ -0.6
VPS26B-207ENST00000532160 ANP32AP39687 249 aaKnown RBP11.3□□□□□ -0.6
VPS26B-207ENST00000532160 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
VPS26B-207ENST00000532160 HERVK_113P62684 666 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 MIGA1Q8NAN2 632 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS26B-207ENST00000532160 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 RPTORQ8N122 1335 aa11.3□□□□□ -0.6
VPS26B-207ENST00000532160 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 C19orf81C9J6K1 198 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 USP17L10C9JJH3 530 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 SOX1O00570 391 aaPredicted RBP11.29□□□□□ -0.6
VPS26B-207ENST00000532160 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
VPS26B-207ENST00000532160 GH2P01242 217 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 HLA-DOAP06340 250 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
VPS26B-207ENST00000532160 CAPN2P17655 700 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 CYP7A1P22680 504 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 Q3C1V9 767 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 MAP3K21Q5TCX8 1036 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
VPS26B-207ENST00000532160 C7orf61Q8IZ16 206 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 PORCNQ9H237 461 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 OSBPL3Q9H4L5 887 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 HMX1Q9NP08 348 aaPredicted RBP11.29□□□□□ -0.6
VPS26B-207ENST00000532160 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 RBPJLQ9UBG7 517 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 A0A0C4DFX4 3053 aa11.29□□□□□ -0.6
VPS26B-207ENST00000532160 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 PRKAR2AP13861 404 aaKnown RBP11.28□□□□□ -0.6
VPS26B-207ENST00000532160 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 ERVK-24P63145 666 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 TTC22Q5TAA0 569 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 POTEHQ6S545 545 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 ANKLE1Q8NAG6 615 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 RILPL2Q969X0 211 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 NUDT12Q9BQG2 462 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 GINM1Q9NU53 330 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
VPS26B-207ENST00000532160 FRMPD3Q5JV73 1810 aa11.28□□□□□ -0.6
VPS26B-207ENST00000532160 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.6
VPS26B-207ENST00000532160 LAMA2P24043 3122 aaKnown RBP11.27□□□□□ -0.6
VPS26B-207ENST00000532160 XRCC5P13010 732 aaKnown RBP11.27□□□□□ -0.61
VPS26B-207ENST00000532160 USP5P45974 858 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 ZYXQ15942 572 aaKnown RBP11.27□□□□□ -0.61
VPS26B-207ENST00000532160 CCL14Q16627 93 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L2Q6R6M4 530 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 GPR142Q7Z601 462 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 SOCS4Q8WXH5 440 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 USP6NLQ92738 828 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 FSD1Q9BTV5 496 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 C11orf49Q9H6J7 331 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 OGDHLQ9ULD0 1010 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 PFASO15067 1338 aa11.27□□□□□ -0.61
VPS26B-207ENST00000532160 A0A1W2PPC1 479 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 IGSF3O75054 1194 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 CNMDO75829 334 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 ZKSCAN1P17029 563 aaPredicted RBP11.26□□□□□ -0.61
VPS26B-207ENST00000532160 SYN1P17600 705 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms