RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 PEX10O60683 326 aa16.13■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L2Q6R6M4 530 aa16.13■□□□□ 0.17
CLNS1A-211ENST00000532069 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
CLNS1A-211ENST00000532069 PIEZO1Q92508 2521 aa16.13■□□□□ 0.17
CLNS1A-211ENST00000532069 MYO9BQ13459 2157 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L15C9J2P7 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L13C9JLJ4 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L11C9JVI0 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L18D6R9N7 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L22D6RA61 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L17D6RBQ6 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L19D6RCP7 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L20D6RJB6 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 STRNO43815 780 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 EPHB4P54760 987 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 USP17L24Q0WX57 530 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 PPIGQ13427 754 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 LRRC41Q15345 812 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 ALYREFQ86V81 257 aaKnown RBP16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 ANKRD44Q8N8A2 993 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 SLC44A5Q8NCS7 719 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 FERMT2Q96AC1 680 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 MTIF3Q9H2K0 278 aaKnown RBP16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 CEP126Q9P2H0 1117 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
CLNS1A-211ENST00000532069 DCDC2CA8MYV0 355 aa16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 BMP1P13497 986 aa16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 RHBDL3P58872 404 aa16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 RNF180Q86T96 592 aa16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 NPLOC4Q8TAT6 608 aa16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 NOL10Q9BSC4 688 aaKnown RBP16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 PBX4Q9BYU1 374 aa16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 PHF24Q9UPV7 400 aa16.11■□□□□ 0.17
CLNS1A-211ENST00000532069 PQBP1O60828 265 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-211ENST00000532069 GPR37L1O60883 481 aa16.1■□□□□ 0.17
CLNS1A-211ENST00000532069 CRACR2BQ8N4Y2 399 aaPredicted RBP16.1■□□□□ 0.17
CLNS1A-211ENST00000532069 TRPV1Q8NER1 839 aa16.1■□□□□ 0.17
CLNS1A-211ENST00000532069 TOX2Q96NM4 488 aa16.1■□□□□ 0.17
CLNS1A-211ENST00000532069 SLC28A3Q9HAS3 691 aa16.1■□□□□ 0.17
CLNS1A-211ENST00000532069 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
CLNS1A-211ENST00000532069 RARBP10826 455 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 ITGB8P26012 769 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 PHKA1P46020 1223 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 USP14P54578 494 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 ANO1Q5XXA6 986 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 PSRC1Q6PGN9 363 aaPredicted RBP16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 ATF7IPQ6VMQ6 1270 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 LBX2Q6XYB7 198 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 NECAB3Q96P71 396 aaPredicted RBP16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 FEZ1Q99689 392 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 MROH7Q68CQ1 1323 aa16.09■□□□□ 0.17
CLNS1A-211ENST00000532069 CIAO1O76071 339 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 TIMP1P01033 207 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 MECOMQ03112 1051 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 RRP1BQ14684 758 aaKnown RBP16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 TEX11Q8IYF3 940 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 HERVK_113Q902F9 699 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 C12orf42Q96LP6 360 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.08■□□□□ 0.164e-13■■□□□ 11.5
CLNS1A-211ENST00000532069 XPNPEP3Q9NQH7 507 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 NRBP1Q9UHY1 535 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 ZBTB21Q9ULJ3 1066 aa16.08■□□□□ 0.16
CLNS1A-211ENST00000532069 ERC2O15083 957 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 IGHA2P01877 340 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 SKIV2LQ15477 1246 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 MFSD5Q6N075 450 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 ANKRD33Q7Z3H0 272 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 TMEM199Q8N511 208 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 NUP133Q8WUM0 1156 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 EPHX3Q9H6B9 360 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 COG5Q9UP83 839 aa16.07■□□□□ 0.16
CLNS1A-211ENST00000532069 CNMDO75829 334 aa16.06■□□□□ 0.16
CLNS1A-211ENST00000532069 PLCG2P16885 1265 aa16.06■□□□□ 0.16
CLNS1A-211ENST00000532069 ADORA2AP29274 412 aa16.06■□□□□ 0.16
CLNS1A-211ENST00000532069 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
CLNS1A-211ENST00000532069 CATSPERGQ6ZRH7 1159 aa16.06■□□□□ 0.16
CLNS1A-211ENST00000532069 A0A1W2PQ45 241 aaPredicted RBP16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 A0A1W2PQY0 241 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 BAG3O95817 575 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 HLA-DOAP06340 250 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 PBX2P40425 430 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 IL15P40933 162 aaPredicted RBP16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 RASGRF1Q13972 1273 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 TMEM240Q5SV17 173 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 ATG9AQ7Z3C6 839 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 MICALL1Q8N3F8 863 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 TSEN34Q9BSV6 310 aaKnown RBP16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 MUC6Q6W4X9 2439 aa16.05■□□□□ 0.16
CLNS1A-211ENST00000532069 ZNF521Q96K83 1311 aa16.04■□□□□ 0.16
CLNS1A-211ENST00000532069 SIPA1L1O43166 1804 aa16.04■□□□□ 0.16
CLNS1A-211ENST00000532069 APBB1O00213 710 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms