RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 SHROOM1Q2M3G4 852 aaPredicted RBP17.79■□□□□ 0.44
NXF1-210ENST00000531579 C12orf42Q96LP6 360 aa17.79■□□□□ 0.44
NXF1-210ENST00000531579 FEZ1Q99689 392 aa17.79■□□□□ 0.44
NXF1-210ENST00000531579 KANSL2Q9H9L4 492 aa17.79■□□□□ 0.44
NXF1-210ENST00000531579 CCDC171Q6TFL3 1326 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 CYP2C8P10632 490 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 HSPD1P10809 573 aaKnown RBP17.78■□□□□ 0.44
NXF1-210ENST00000531579 AKR1B1P15121 316 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 PPARAQ07869 468 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 TREML2Q5T2D2 321 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 CWC27Q6UX04 472 aaKnown RBP17.78■□□□□ 0.44
NXF1-210ENST00000531579 SMCR8Q8TEV9 937 aaPredicted RBP17.78■□□□□ 0.44
NXF1-210ENST00000531579 SH2D4AQ9H788 454 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 ARHGEF10LQ9HCE6 1279 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 EMILIN3Q9NT22 766 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 CASP8AP2Q9UKL3 1982 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 ROBO3Q96MS0 1386 aa17.78■□□□□ 0.44
NXF1-210ENST00000531579 PHIPQ8WWQ0 1821 aa17.77■□□□□ 0.44
NXF1-210ENST00000531579 SMIM22K7EJ46 135 aa17.77■□□□□ 0.44
NXF1-210ENST00000531579 GNRH1P01148 92 aa17.77■□□□□ 0.44
NXF1-210ENST00000531579 FGAP02671 866 aa17.77■□□□□ 0.44
NXF1-210ENST00000531579 GSPT1P15170 499 aaKnown RBP17.77■□□□□ 0.44
NXF1-210ENST00000531579 GCLCP48506 637 aaPredicted RBP17.77■□□□□ 0.44
NXF1-210ENST00000531579 RUFY2Q8WXA3 655 aa17.77■□□□□ 0.44
NXF1-210ENST00000531579 MCOLN1Q9GZU1 580 aa17.77■□□□□ 0.44
NXF1-210ENST00000531579 ANAPC4Q9UJX5 808 aa17.77■□□□□ 0.44
NXF1-210ENST00000531579 FOXP2O15409 715 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 RASA1P20936 1047 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 ACER1Q8TDN7 264 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 EFCC1Q9HA90 598 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 CPA4Q9UI42 421 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 TMX2Q9Y320 296 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 ATAD5Q96QE3 1844 aa17.76■□□□□ 0.43
NXF1-210ENST00000531579 BAZ2AQ9UIF9 1905 aaKnown RBP17.76■□□□□ 0.43
NXF1-210ENST00000531579 ZMYM6O95789 1325 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 ADGRA2Q96PE1 1338 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L15C9J2P7 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L13C9JLJ4 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L11C9JVI0 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L18D6R9N7 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L22D6RA61 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L17D6RBQ6 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L19D6RCP7 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L20D6RJB6 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 BCRP11274 1271 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 IRX3P78415 501 aaPredicted RBP17.75■□□□□ 0.43
NXF1-210ENST00000531579 LACTBP83111 547 aaPredicted RBP17.75■□□□□ 0.43
NXF1-210ENST00000531579 ICA1Q05084 483 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 USP17L24Q0WX57 530 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 ZNF589Q86UQ0 364 aaPredicted RBP17.75■□□□□ 0.43
NXF1-210ENST00000531579 SIAH1Q8IUQ4 282 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 CD99L2Q8TCZ2 262 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 GTF3C2Q8WUA4 911 aaPredicted RBP17.75■□□□□ 0.43
NXF1-210ENST00000531579 LPAR1Q92633 364 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 ASCC2Q9H1I8 757 aaPredicted RBP17.75■□□□□ 0.43
NXF1-210ENST00000531579 TRIM17Q9Y577 477 aa17.75■□□□□ 0.43
NXF1-210ENST00000531579 A0A1W2PRG0 241 aa17.74■□□□□ 0.43
NXF1-210ENST00000531579 PCP11498 1178 aaKnown RBP17.74■□□□□ 0.43
NXF1-210ENST00000531579 HOXD10P28358 340 aa17.74■□□□□ 0.43
NXF1-210ENST00000531579 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
NXF1-210ENST00000531579 FBXO46Q6PJ61 603 aaPredicted RBP17.74■□□□□ 0.43
NXF1-210ENST00000531579 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
NXF1-210ENST00000531579 FGRP09769 529 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 EEF2P13639 858 aaKnown RBP17.73■□□□□ 0.43
NXF1-210ENST00000531579 NT5C2P49902 561 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 PRMT2P55345 433 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 ZYXQ15942 572 aaKnown RBP17.73■□□□□ 0.43
NXF1-210ENST00000531579 CATSPERGQ6ZRH7 1159 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 OTOP1Q7RTM1 612 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 NEDD1Q8NHV4 660 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 ABHD8Q96I13 439 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 DSCC1Q9BVC3 393 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
NXF1-210ENST00000531579 NYAP2Q9P242 653 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 CTNNA3Q9UI47 895 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 SYNPO2Q9UMS6 1093 aa17.73■□□□□ 0.43
NXF1-210ENST00000531579 RAD50Q92878 1312 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 ZNF213O14771 459 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 PRDM1O75626 825 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 TSPY3P0CV98 308 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 TSPY8P0CW00 308 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 CHMLP26374 656 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 TFAP4Q01664 338 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 FAM110CQ1W6H9 321 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 P2RX7Q99572 595 aaKnown RBP17.72■□□□□ 0.43
NXF1-210ENST00000531579 VCPKMTQ9H867 229 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 HOXC10Q9NYD6 342 aa17.72■□□□□ 0.43
NXF1-210ENST00000531579 PTPRFP10586 1907 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 ORC4O43929 436 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.43
NXF1-210ENST00000531579 VCAM1P19320 739 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 PSMC4P43686 418 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 FCGRTP55899 365 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 HERVK_113P62684 666 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 ANKRD13CQ8N6S4 541 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 MKL1Q969V6 931 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
NXF1-210ENST00000531579 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
NXF1-210ENST00000531579 PTPN22Q9Y2R2 807 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms