RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 SLC44A5Q8NCS7 719 aa17.26■□□□□ 0.35
CTSB-218ENST00000530624 DYNLL2Q96FJ2 89 aa17.26■□□□□ 0.35
CTSB-218ENST00000530624 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
CTSB-218ENST00000530624 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
CTSB-218ENST00000530624 SRRDQ9UH36 339 aa17.26■□□□□ 0.35
CTSB-218ENST00000530624 PTCH2Q9Y6C5 1203 aa17.26■□□□□ 0.35
CTSB-218ENST00000530624 CYP2D7A0A087X1C5 515 aa17.25■□□□□ 0.35
CTSB-218ENST00000530624 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
CTSB-218ENST00000530624 CDK8P49336 464 aa17.25■□□□□ 0.35
CTSB-218ENST00000530624 SEPT2Q15019 361 aa17.25■□□□□ 0.35
CTSB-218ENST00000530624 GTF3C2Q8WUA4 911 aaPredicted RBP17.25■□□□□ 0.35
CTSB-218ENST00000530624 MORF4L1Q9UBU8 362 aa17.25■□□□□ 0.35
CTSB-218ENST00000530624 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
CTSB-218ENST00000530624 IRX3P78415 501 aaPredicted RBP17.24■□□□□ 0.35
CTSB-218ENST00000530624 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
CTSB-218ENST00000530624 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
CTSB-218ENST00000530624 ACER1Q8TDN7 264 aa17.24■□□□□ 0.35
CTSB-218ENST00000530624 FEZ1Q99689 392 aa17.24■□□□□ 0.35
CTSB-218ENST00000530624 EPB41L4AQ9HCS5 686 aaPredicted RBP17.24■□□□□ 0.35
CTSB-218ENST00000530624 MGAMO43451 1857 aa17.24■□□□□ 0.35
CTSB-218ENST00000530624 MYH8P13535 1937 aa17.23■□□□□ 0.35
CTSB-218ENST00000530624 SMIM22K7EJ46 135 aa17.23■□□□□ 0.35
CTSB-218ENST00000530624 HERVK_113P62684 666 aa17.23■□□□□ 0.35
CTSB-218ENST00000530624 SLC9C1Q4G0N8 1177 aa17.23■□□□□ 0.35
CTSB-218ENST00000530624 B4GALNT3Q6L9W6 998 aa17.23■□□□□ 0.35
CTSB-218ENST00000530624 ZNF333Q96JL9 665 aa17.23■□□□□ 0.35
CTSB-218ENST00000530624 SEC62Q99442 399 aaKnown RBP17.23■□□□□ 0.35
CTSB-218ENST00000530624 P2RX7Q99572 595 aaKnown RBP17.23■□□□□ 0.35
CTSB-218ENST00000530624 RBBP6Q7Z6E9 1792 aaKnown RBP17.23■□□□□ 0.35
CTSB-218ENST00000530624 A0A1W2PRG0 241 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L15C9J2P7 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L13C9JLJ4 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L11C9JVI0 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L18D6R9N7 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L22D6RA61 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L17D6RBQ6 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L19D6RCP7 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L20D6RJB6 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
CTSB-218ENST00000530624 AKR1B1P15121 316 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 VCAM1P19320 739 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 SOX10P56693 466 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 USP17L24Q0WX57 530 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 LBX2Q6XYB7 198 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 PLEKHM2Q8IWE5 1019 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 IFNL3Q8IZI9 196 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 HELLSQ9NRZ9 838 aa17.22■□□□□ 0.35
CTSB-218ENST00000530624 MYPNQ86TC9 1320 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 ICA1Q05084 483 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 IRF5Q13568 498 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 CATSPERGQ6ZRH7 1159 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 LPAR1Q92633 364 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 ZNF287Q9HBT7 754 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 ARHGEF10LQ9HCE6 1279 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
CTSB-218ENST00000530624 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
CTSB-218ENST00000530624 BRCA2P51587 3418 aa17.2■□□□□ 0.34
CTSB-218ENST00000530624 TDO2P48775 406 aa17.2■□□□□ 0.34
CTSB-218ENST00000530624 MLLT1Q03111 559 aaPredicted RBP17.2■□□□□ 0.34
CTSB-218ENST00000530624 PRKCZQ05513 592 aa17.2■□□□□ 0.34
CTSB-218ENST00000530624 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
CTSB-218ENST00000530624 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
CTSB-218ENST00000530624 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 TNPO2O14787 897 aaKnown RBP17.19■□□□□ 0.34
CTSB-218ENST00000530624 FOXP2O15409 715 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 TNRC18O15417 2968 aaPredicted RBP17.19■□□□□ 0.34
CTSB-218ENST00000530624 APPP05067 770 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 RASA1P20936 1047 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 ZYXQ15942 572 aaKnown RBP17.19■□□□□ 0.34
CTSB-218ENST00000530624 GPRC5AQ8NFJ5 357 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 RAET1EQ8TD07 263 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 PXYLP1Q8TE99 480 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 COA7Q96BR5 231 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.19■□□□□ 0.34
CTSB-218ENST00000530624 TXNRD2Q9NNW7 524 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 RABGAP1Q9Y3P9 1069 aa17.19■□□□□ 0.34
CTSB-218ENST00000530624 GRK4P32298 578 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 ERVK-9P63128 1117 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 ERVK-24P63145 666 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 MCMDC2Q4G0Z9 681 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 POTEEQ6S8J3 1075 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 SLAIN1Q8ND83 568 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 NAPBQ9H115 298 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
CTSB-218ENST00000530624 VCPKMTQ9H867 229 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 GABRQQ9UN88 632 aa17.18■□□□□ 0.34
CTSB-218ENST00000530624 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
CTSB-218ENST00000530624 FLT3LGP49771 235 aa17.17■□□□□ 0.34
CTSB-218ENST00000530624 ALX1Q15699 326 aa17.17■□□□□ 0.34
CTSB-218ENST00000530624 SH3TC2Q8TF17 1288 aa17.17■□□□□ 0.34
CTSB-218ENST00000530624 ZMYM6O95789 1325 aa17.17■□□□□ 0.34
CTSB-218ENST00000530624 PLIN4Q96Q06 1357 aa17.16■□□□□ 0.34
CTSB-218ENST00000530624 IGKV6D-41A0A0C4DH26 115 aa17.16■□□□□ 0.34
CTSB-218ENST00000530624 A0A0D9SFI3 127 aa17.16■□□□□ 0.34
CTSB-218ENST00000530624 SPDYE16A6NNV3 312 aaPredicted RBP17.16■□□□□ 0.34
CTSB-218ENST00000530624 WDR46O15213 610 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms