RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 USP17L13C9JLJ4 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L11C9JVI0 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L18D6R9N7 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L22D6RA61 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L17D6RBQ6 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L19D6RCP7 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L20D6RJB6 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 IGSF3O75054 1194 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 GDF11O95390 407 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 MCAMP43121 646 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L24Q0WX57 530 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 SH3RF1Q7Z6J0 888 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 BTBD7Q9P203 1132 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 HDAC5Q9UQL6 1122 aa20.04■□□□□ 0.8
CHMP4A-203ENST00000527154 CDK5RAP2Q96SN8 1893 aa20.03■□□□□ 0.8
CHMP4A-203ENST00000527154 PLCG2P16885 1265 aa20.03■□□□□ 0.8
CHMP4A-203ENST00000527154 ATP2B2Q01814 1243 aa20.03■□□□□ 0.8
CHMP4A-203ENST00000527154 TRIM60Q495X7 471 aa20.03■□□□□ 0.8
CHMP4A-203ENST00000527154 GJC2Q5T442 439 aaPredicted RBP20.03■□□□□ 0.8
CHMP4A-203ENST00000527154 TATDN1Q6P1N9 297 aa20.03■□□□□ 0.8
CHMP4A-203ENST00000527154 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
CHMP4A-203ENST00000527154 SEPT4O43236 478 aa20.02■□□□□ 0.8
CHMP4A-203ENST00000527154 ITGB8P26012 769 aa20.02■□□□□ 0.8
CHMP4A-203ENST00000527154 KIAA1683Q9H0B3 1180 aa20.02■□□□□ 0.8
CHMP4A-203ENST00000527154 PALD1Q9ULE6 856 aa20.02■□□□□ 0.8
CHMP4A-203ENST00000527154 NCOR1O75376 2440 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 SPDYE16A6NNV3 312 aaPredicted RBP20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 BAG3O95817 575 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 VCAM1P19320 739 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 EPHB4P54760 987 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 GRIN2CQ14957 1233 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 ADGRA1Q86SQ6 560 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 TGFBRAP1Q8WUH2 860 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 AATFQ9NY61 560 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 NDUFB9Q9Y6M9 179 aa20.01■□□□□ 0.79
CHMP4A-203ENST00000527154 KBTBD13C9JR72 458 aa20■□□□□ 0.79
CHMP4A-203ENST00000527154 CNGA1P29973 690 aa20■□□□□ 0.79
CHMP4A-203ENST00000527154 MAPKAPK5Q8IW41 473 aa20■□□□□ 0.79
CHMP4A-203ENST00000527154 IVNS1ABPQ9Y6Y0 642 aa20■□□□□ 0.79
CHMP4A-203ENST00000527154 KIAA0355O15063 1070 aa19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 STRNO43815 780 aa19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 GH2P01242 217 aa19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 USP14P54578 494 aa19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 LRRC41Q15345 812 aa19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 CRACR2BQ8N4Y2 399 aaPredicted RBP19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 MEIS3Q99687 375 aa19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 PRDM5Q9NQX1 630 aaPredicted RBP19.99■□□□□ 0.79
CHMP4A-203ENST00000527154 E9PSI1 815 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 PLA2G5P39877 138 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 NAA16Q6N069 864 aaPredicted RBP19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 SHCBP1Q8NEM2 672 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 EHD4Q9H223 541 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 CWC22Q9HCG8 908 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 LRP2BPQ9P2M1 347 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 PHF24Q9UPV7 400 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 TACC3Q9Y6A5 838 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 CHD9Q3L8U1 2897 aa19.98■□□□□ 0.79
CHMP4A-203ENST00000527154 ROBO3Q96MS0 1386 aa19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 A0A0G2JMZ2 1700 aa19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 UQCRFS1P1P0C7P4 283 aa19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 DNAJB2P25686 324 aa19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 ADORA2AP29274 412 aa19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 ADCYAP1R1P41586 468 aa19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 TLE2Q04725 743 aa19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 ATXN2LQ8WWM7 1075 aaKnown RBP19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 RNPC3Q96LT9 517 aaKnown RBP19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 NOL10Q9BSC4 688 aaKnown RBP19.97■□□□□ 0.79
CHMP4A-203ENST00000527154 SRGAP3O43295 1099 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 COBLO75128 1261 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 HLA-DOAP06340 250 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 ATF7IPQ6VMQ6 1270 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 ABRAQ8N0Z2 381 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 ACER1Q8TDN7 264 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 NEUROD6Q96NK8 337 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 MOV10L1Q9BXT6 1211 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 RAPGEFL1Q9UHV5 662 aa19.96■□□□□ 0.79
CHMP4A-203ENST00000527154 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 CLTBP09497 229 aa19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 SLFN5Q08AF3 891 aa19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 FAM47AQ5JRC9 791 aa19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 AKNAD1Q5T1N1 836 aa19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 TRIM34Q9BYJ4 488 aa19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 NRBP1Q9UHY1 535 aa19.95■□□□□ 0.78
CHMP4A-203ENST00000527154 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 GUCY1A2P33402 732 aa19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 WDR78Q5VTH9 848 aa19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 DPP9Q86TI2 863 aa19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 ZNF512BQ96KM6 892 aaPredicted RBP19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 FEZ1Q99689 392 aa19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 ZNF576Q9H609 170 aa19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 RPAP3Q9H6T3 665 aaPredicted RBP19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 SMC4Q9NTJ3 1288 aa19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 BDP1A6H8Y1 2624 aa19.94■□□□□ 0.78
CHMP4A-203ENST00000527154 ZYXQ15942 572 aaKnown RBP19.93■□□□□ 0.78
CHMP4A-203ENST00000527154 RASIP1Q5U651 963 aa19.93■□□□□ 0.78
CHMP4A-203ENST00000527154 ANO1Q5XXA6 986 aa19.93■□□□□ 0.78
CHMP4A-203ENST00000527154 ANKRD33Q7Z3H0 272 aa19.93■□□□□ 0.78
CHMP4A-203ENST00000527154 TOX2Q96NM4 488 aa19.93■□□□□ 0.78
CHMP4A-203ENST00000527154 SPATC1LQ9H0A9 340 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms