RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 BCAR3O75815 825 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 WDR78Q5VTH9 848 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 MFSD14CQ5VZR4 134 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 TATDN1Q6P1N9 297 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 MIGA1Q8NAN2 632 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
CSTF3-206ENST00000524827 EDC3Q96F86 508 aaKnown RBP16.91■□□□□ 0.3
CSTF3-206ENST00000524827 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
CSTF3-206ENST00000524827 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 IDH1O75874 414 aaKnown RBP16.9■□□□□ 0.3
CSTF3-206ENST00000524827 VCAM1P19320 739 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 PTPREP23469 700 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 EHD4Q9H223 541 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
CSTF3-206ENST00000524827 SERPINB13Q9UIV8 391 aa16.9■□□□□ 0.3
CSTF3-206ENST00000524827 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.29
CSTF3-206ENST00000524827 USP5P45974 858 aa16.89■□□□□ 0.29
CSTF3-206ENST00000524827 USP14P54578 494 aa16.89■□□□□ 0.29
CSTF3-206ENST00000524827 ACER1Q8TDN7 264 aa16.89■□□□□ 0.29
CSTF3-206ENST00000524827 SENP6Q9GZR1 1112 aaPredicted RBP16.89■□□□□ 0.29
CSTF3-206ENST00000524827 KIAA1683Q9H0B3 1180 aa16.89■□□□□ 0.29
CSTF3-206ENST00000524827 BTBD7Q9P203 1132 aa16.89■□□□□ 0.29
CSTF3-206ENST00000524827 DDX20Q9UHI6 824 aaKnown RBP16.89■□□□□ 0.29
CSTF3-206ENST00000524827 HOXC6P09630 235 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 ATP8B2P98198 1209 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 GRB14Q14449 540 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 CERKLQ49MI3 558 aaPredicted RBP16.88■□□□□ 0.29
CSTF3-206ENST00000524827 LBX2Q6XYB7 198 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 CERS3Q8IU89 383 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 NPLOC4Q8TAT6 608 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 LPAR1Q92633 364 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 LBHD1Q9BQE6 289 aaPredicted RBP16.88■□□□□ 0.29
CSTF3-206ENST00000524827 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 IVNS1ABPQ9Y6Y0 642 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 DNAH12Q6ZR08 3092 aa16.88■□□□□ 0.29
CSTF3-206ENST00000524827 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
CSTF3-206ENST00000524827 MSCO60682 206 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 CNGA1P29973 690 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 CYP2C19P33261 490 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 ATN1P54259 1190 aaPredicted RBP16.87■□□□□ 0.29
CSTF3-206ENST00000524827 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 MAGEB6Q8N7X4 407 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 TRPV1Q8NER1 839 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 GUCD1Q96NT3 240 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 CCDC8Q9H0W5 538 aaPredicted RBP16.87■□□□□ 0.29
CSTF3-206ENST00000524827 RPAP3Q9H6T3 665 aaPredicted RBP16.87■□□□□ 0.29
CSTF3-206ENST00000524827 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
CSTF3-206ENST00000524827 UNC80Q8N2C7 3258 aa16.87■□□□□ 0.29
CSTF3-206ENST00000524827 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
CSTF3-206ENST00000524827 DNM1LO00429 736 aa16.86■□□□□ 0.29
CSTF3-206ENST00000524827 SHMT1P34896 483 aa16.86■□□□□ 0.29
CSTF3-206ENST00000524827 FAM109BQ6ICB4 259 aaPredicted RBP16.86■□□□□ 0.29
CSTF3-206ENST00000524827 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
CSTF3-206ENST00000524827 EAF2Q96CJ1 260 aaPredicted RBP16.86■□□□□ 0.29
CSTF3-206ENST00000524827 CABP5Q9NP86 173 aa16.86■□□□□ 0.29
CSTF3-206ENST00000524827 LTBP2Q14767 1821 aa16.86■□□□□ 0.29
CSTF3-206ENST00000524827 ZNF236Q9UL36 1845 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 LAMA2P24043 3122 aaKnown RBP16.85■□□□□ 0.29
CSTF3-206ENST00000524827 IGHA2P01877 340 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 CYBAP13498 195 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 GUCY1A2P33402 732 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 RTP1P59025 263 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 ANTXR1Q9H6X2 564 aa16.85■□□□□ 0.29
CSTF3-206ENST00000524827 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
CSTF3-206ENST00000524827 PLCD1P51178 756 aa16.84■□□□□ 0.29
CSTF3-206ENST00000524827 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
CSTF3-206ENST00000524827 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.84■□□□□ 0.29
CSTF3-206ENST00000524827 COL25A1Q9BXS0 654 aaPredicted RBP16.84■□□□□ 0.29
CSTF3-206ENST00000524827 PRKAG2Q9UGJ0 569 aa16.84■□□□□ 0.29
CSTF3-206ENST00000524827 RLFQ13129 1914 aa16.84■□□□□ 0.29
CSTF3-206ENST00000524827 A0A0G2JMZ2 1700 aa16.83■□□□□ 0.28
CSTF3-206ENST00000524827 ADORA2AP29274 412 aa16.83■□□□□ 0.28
CSTF3-206ENST00000524827 SEPT2Q15019 361 aa16.83■□□□□ 0.28
CSTF3-206ENST00000524827 GJC2Q5T442 439 aaPredicted RBP16.83■□□□□ 0.28
CSTF3-206ENST00000524827 RIOK1Q9BRS2 568 aaKnown RBP16.83■□□□□ 0.28
CSTF3-206ENST00000524827 MOV10L1Q9BXT6 1211 aaKnown RBP16.83■□□□□ 0.28
CSTF3-206ENST00000524827 ATP11BQ9Y2G3 1177 aa16.83■□□□□ 0.28
CSTF3-206ENST00000524827 A0A1W2PRG0 241 aa16.82■□□□□ 0.28
CSTF3-206ENST00000524827 GABPAQ06546 454 aa16.82■□□□□ 0.28
CSTF3-206ENST00000524827 OLFML2BQ68BL8 750 aa16.82■□□□□ 0.28
CSTF3-206ENST00000524827 TMED8Q6PL24 325 aaPredicted RBP16.82■□□□□ 0.28
CSTF3-206ENST00000524827 DPP9Q86TI2 863 aa16.82■□□□□ 0.28
CSTF3-206ENST00000524827 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
CSTF3-206ENST00000524827 EVX2Q03828 476 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms