RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 SMCR8Q8TEV9 937 aaPredicted RBP19.6■□□□□ 0.73
PABPC1-221ENST00000522720 RILPL2Q969X0 211 aa19.6■□□□□ 0.73
PABPC1-221ENST00000522720 KIAA1683Q9H0B3 1180 aa19.6■□□□□ 0.73
PABPC1-221ENST00000522720 ASCC2Q9H1I8 757 aaPredicted RBP19.6■□□□□ 0.73
PABPC1-221ENST00000522720 HELLSQ9NRZ9 838 aa19.6■□□□□ 0.73
PABPC1-221ENST00000522720 HPS5Q9UPZ3 1129 aa19.6■□□□□ 0.73
PABPC1-221ENST00000522720 AKR1B1P15121 316 aa19.59■□□□□ 0.73
PABPC1-221ENST00000522720 OSBPP22059 807 aa19.59■□□□□ 0.73
PABPC1-221ENST00000522720 C12orf42Q96LP6 360 aa19.59■□□□□ 0.73
PABPC1-221ENST00000522720 FEZ1Q99689 392 aa19.59■□□□□ 0.73
PABPC1-221ENST00000522720 ARHGAP39Q9C0H5 1083 aa19.59■□□□□ 0.73
PABPC1-221ENST00000522720 PTPN22Q9Y2R2 807 aa19.59■□□□□ 0.73
PABPC1-221ENST00000522720 GNRH1P01148 92 aa19.58■□□□□ 0.72
PABPC1-221ENST00000522720 PDE4AP27815 886 aa19.58■□□□□ 0.72
PABPC1-221ENST00000522720 USP14P54578 494 aa19.58■□□□□ 0.72
PABPC1-221ENST00000522720 CCDC129Q6ZRS4 1044 aa19.58■□□□□ 0.72
PABPC1-221ENST00000522720 FAM227BQ96M60 508 aa19.58■□□□□ 0.72
PABPC1-221ENST00000522720 ROBO3Q96MS0 1386 aa19.57■□□□□ 0.72
PABPC1-221ENST00000522720 CTGFP29279 349 aa19.57■□□□□ 0.72
PABPC1-221ENST00000522720 PSMC4P43686 418 aa19.57■□□□□ 0.72
PABPC1-221ENST00000522720 GCLCP48506 637 aaPredicted RBP19.57■□□□□ 0.72
PABPC1-221ENST00000522720 ZYXQ15942 572 aaKnown RBP19.57■□□□□ 0.72
PABPC1-221ENST00000522720 MCMDC2Q4G0Z9 681 aa19.57■□□□□ 0.72
PABPC1-221ENST00000522720 NAPBQ9H115 298 aa19.57■□□□□ 0.72
PABPC1-221ENST00000522720 ZSWIM8A7E2V4 1837 aa19.57■□□□□ 0.72
PABPC1-221ENST00000522720 A0A0D9SFI3 127 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 A0A1W2PRG0 241 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 FOXP2O15409 715 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 SDSP20132 328 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 IRX3P78415 501 aaPredicted RBP19.56■□□□□ 0.72
PABPC1-221ENST00000522720 SIAH1Q8IUQ4 282 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 ANKRD13CQ8N6S4 541 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 TRIM47Q96LD4 638 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 P2RX7Q99572 595 aaKnown RBP19.56■□□□□ 0.72
PABPC1-221ENST00000522720 MKNK2Q9HBH9 465 aa19.56■□□□□ 0.72
PABPC1-221ENST00000522720 MGAMO43451 1857 aa19.55■□□□□ 0.72
PABPC1-221ENST00000522720 FMNL1O95466 1100 aaPredicted RBP19.55■□□□□ 0.72
PABPC1-221ENST00000522720 RASA1P20936 1047 aa19.55■□□□□ 0.72
PABPC1-221ENST00000522720 NMIQ13287 307 aaPredicted RBP19.55■□□□□ 0.72
PABPC1-221ENST00000522720 FAM110CQ1W6H9 321 aa19.55■□□□□ 0.72
PABPC1-221ENST00000522720 STK11IPQ8N1F8 1099 aa19.55■□□□□ 0.72
PABPC1-221ENST00000522720 ZNF287Q9HBT7 754 aa19.55■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 ECM2O94769 699 aaPredicted RBP19.54■□□□□ 0.72
PABPC1-221ENST00000522720 HOXD10P28358 340 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 PRMT2P55345 433 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 ICA1Q05084 483 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 ALX1Q15699 326 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 VPS53Q5VIR6 699 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.54■□□□□ 0.72
PABPC1-221ENST00000522720 KANSL2Q9H9L4 492 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 ARHGEF10LQ9HCE6 1279 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 HTTP42858 3142 aa19.54■□□□□ 0.72
PABPC1-221ENST00000522720 DOCK3Q8IZD9 2030 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 VCAM1P19320 739 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 FCGRTP55899 365 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 HERVK_113P62684 666 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 CATSPERGQ6ZRH7 1159 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 CLEC10AQ8IUN9 316 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 SH2D4AQ9H788 454 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 SRRDQ9UH36 339 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 TMX2Q9Y320 296 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 PTCH2Q9Y6C5 1203 aa19.53■□□□□ 0.72
PABPC1-221ENST00000522720 HIP1O00291 1037 aa19.52■□□□□ 0.72
PABPC1-221ENST00000522720 SLC3A2P08195 630 aaKnown RBP19.52■□□□□ 0.72
PABPC1-221ENST00000522720 PPARAQ07869 468 aa19.52■□□□□ 0.72
PABPC1-221ENST00000522720 ZNF589Q86UQ0 364 aaPredicted RBP19.52■□□□□ 0.72
PABPC1-221ENST00000522720 ZNF444Q8N0Y2 327 aaPredicted RBP19.52■□□□□ 0.72
PABPC1-221ENST00000522720 MORF4L1Q9UBU8 362 aa19.52■□□□□ 0.72
PABPC1-221ENST00000522720 GREB1LQ9C091 1923 aaPredicted RBP19.51■□□□□ 0.71
PABPC1-221ENST00000522720 PRDM1O75626 825 aa19.51■□□□□ 0.71
PABPC1-221ENST00000522720 HSPD1P10809 573 aaKnown RBP19.51■□□□□ 0.71
PABPC1-221ENST00000522720 EEF2P13639 858 aaKnown RBP19.51■□□□□ 0.71
PABPC1-221ENST00000522720 PDE4BQ07343 736 aa19.51■□□□□ 0.71
PABPC1-221ENST00000522720 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
PABPC1-221ENST00000522720 GTF3C2Q8WUA4 911 aaPredicted RBP19.51■□□□□ 0.71
PABPC1-221ENST00000522720 LPAR1Q92633 364 aa19.51■□□□□ 0.71
PABPC1-221ENST00000522720 RBPJLQ9UBG7 517 aa19.51■□□□□ 0.71
PABPC1-221ENST00000522720 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
PABPC1-221ENST00000522720 FGAP02671 866 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 MFAP1P55081 439 aaKnown RBP19.5■□□□□ 0.71
PABPC1-221ENST00000522720 KIAA1755Q5JYT7 1200 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 CWC27Q6UX04 472 aaKnown RBP19.5■□□□□ 0.71
PABPC1-221ENST00000522720 GPRC5AQ8NFJ5 357 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 ARMC5Q96C12 935 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 RPAP3Q9H6T3 665 aaPredicted RBP19.5■□□□□ 0.71
PABPC1-221ENST00000522720 VCPKMTQ9H867 229 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 TXNRD2Q9NNW7 524 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 DIAPH3Q9NSV4 1193 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 ANAPC4Q9UJX5 808 aa19.5■□□□□ 0.71
PABPC1-221ENST00000522720 TNPO2O14787 897 aaKnown RBP19.49■□□□□ 0.71
PABPC1-221ENST00000522720 GSPT1P15170 499 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms