RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RHBDD1Q8TEB9 315 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 GJA10Q969M2 543 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 GPR101Q96P66 508 aaPredicted RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 CDC6Q99741 560 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 MRPL4Q9BYD3 311 aaKnown RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 EPN3Q9H201 632 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 ZFYVE1Q9HBF4 777 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 SEC31BQ9NQW1 1179 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 STRN4Q9NRL3 753 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 MORC2Q9Y6X9 1032 aaPredicted RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 PRSS47A8MTI9 375 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 C11orf95C9JLR9 678 aaPredicted RBP4.97□□□□□ -1.61
SKP1-209ENST00000522552 TYRP1P17643 537 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 POU3F2P20265 443 aaPredicted RBP4.97□□□□□ -1.61
SKP1-209ENST00000522552 STK3Q13188 491 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 GALEQ14376 348 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 ABCB5Q2M3G0 1257 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 NLRP13Q86W25 1043 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 SUGP1Q8IWZ8 645 aaKnown RBP4.97□□□□□ -1.61
SKP1-209ENST00000522552 PPHLN1Q8NEY8 458 aaKnown RBP4.97□□□□□ -1.61
SKP1-209ENST00000522552 PI4K2BQ8TCG2 481 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 MPP4Q96JB8 637 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 ZSCAN10Q96SZ4 725 aaPredicted RBP4.97□□□□□ -1.61
SKP1-209ENST00000522552 TM9SF2Q99805 663 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 MUC3BQ9H195 1237 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 ARHGEF4Q9NR80 690 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 LRRC4BQ9NT99 713 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 PGPEP1Q9NXJ5 209 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 ZFATQ9P243 1243 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 ZBTB21Q9ULJ3 1066 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 PHTF1Q9UMS5 762 aa4.97□□□□□ -1.61
SKP1-209ENST00000522552 BTBD11A6QL63 1104 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 ATE1O95260 518 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 NPTXRO95502 500 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 ADH1AP07327 375 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 SNRPBP14678 240 aaKnown RBP4.96□□□□□ -1.61
SKP1-209ENST00000522552 PLA2G4AP47712 749 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 NEK4P51957 841 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 ZYXQ15942 572 aaKnown RBP4.96□□□□□ -1.61
SKP1-209ENST00000522552 TMEM214Q6NUQ4 689 aaKnown RBP4.96□□□□□ -1.61
SKP1-209ENST00000522552 MRPL14Q6P1L8 145 aaKnown RBP4.96□□□□□ -1.61
SKP1-209ENST00000522552 C1orf228Q6PIY5 440 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 MMS22LQ6ZRQ5 1243 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 ZSCAN1Q8NBB4 408 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 SKA1Q96BD8 255 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 ERP27Q96DN0 273 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 AGBL1Q96MI9 1066 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 ZFP42Q96MM3 310 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 TTC1Q99614 292 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 MTFR1LQ9H019 292 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 CNNM2Q9H8M5 875 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 SUCOQ9UBS9 1254 aaKnown RBP4.96□□□□□ -1.61
SKP1-209ENST00000522552 POLG2Q9UHN1 485 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 PCDHB10Q9UN67 800 aa4.96□□□□□ -1.61
SKP1-209ENST00000522552 POLR3KQ9Y2Y1 108 aaPredicted RBP4.96□□□□□ -1.61
SKP1-209ENST00000522552 RPGRIP1LQ68CZ1 1315 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 LTBP3Q9NS15 1303 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 TRBV23-1A0A0A0MS06 115 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 NEMP1O14524 444 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 PMM2O15305 246 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 GRIN3BO60391 1043 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 PF4V1P10720 104 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 BMP2P12643 396 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 ITPKAP23677 461 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 ID4P47928 161 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 GRIA4P48058 902 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 GPSM2P81274 684 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 FAAP100Q0VG06 881 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 KRT72Q14CN4 511 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 PUM3Q15397 648 aaKnown RBP4.96□□□□□ -1.62
SKP1-209ENST00000522552 LONRF1Q17RB8 773 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 HYIQ5T013 277 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
SKP1-209ENST00000522552 XRRA1Q6P2D8 792 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 EPM2AIP1Q7L775 607 aaPredicted RBP4.96□□□□□ -1.62
SKP1-209ENST00000522552 SKAP1Q86WV1 359 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 STK11IPQ8N1F8 1099 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 CLASRPQ8N2M8 674 aaKnown RBP4.96□□□□□ -1.62
SKP1-209ENST00000522552 PARD3BQ8TEW8 1205 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 CLIP3Q96DZ5 547 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 CNTNAP3BQ96NU0 1288 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 CNTNAP3Q9BZ76 1288 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 RSPH9Q9H1X1 276 aaPredicted RBP4.96□□□□□ -1.62
SKP1-209ENST00000522552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.96□□□□□ -1.622e-6■■■□□ 18.4
SKP1-209ENST00000522552 TRIM39Q9HCM9 518 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 TCF7L1Q9HCS4 588 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 ANLNQ9NQW6 1124 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 CLIC5Q9NZA1 410 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 DDX20Q9UHI6 824 aaKnown RBP4.96□□□□□ -1.62
SKP1-209ENST00000522552 ASAP1Q9ULH1 1129 aa4.96□□□□□ -1.62
SKP1-209ENST00000522552 A0A1W2PQU0 124 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 SOBPA7XYQ1 873 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 MEIS3P2A8K0S8 358 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 MEN1O00255 615 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 KPNA6O60684 536 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 APBA3O96018 575 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 EGFRP00533 1210 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 RENBPP51606 427 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 GJA9P57773 515 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 RELBQ01201 579 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms