RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 UIMC1Q96RL1 719 aa13.77□□□□□ -0.21
CTNNA1-234ENST00000522227 EMILIN3Q9NT22 766 aa13.77□□□□□ -0.21
CTNNA1-234ENST00000522227 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
CTNNA1-234ENST00000522227 MROH7-TTC4A0A0A0MT08 1334 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 SALL1Q9NSC2 1324 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 C19orf81C9J6K1 198 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 SEPT4O43236 478 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 RHBDL3P58872 404 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 GRB14Q14449 540 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 ATP2B3Q16720 1220 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 SLF2Q8IX21 1173 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 SIL1Q9H173 461 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 SLC28A3Q9HAS3 691 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
CTNNA1-234ENST00000522227 SMIM22K7EJ46 135 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 GPR37L1O60883 481 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 VAMP4O75379 141 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 PGK1P00558 417 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 ASNSP08243 561 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 HOXC6P09630 235 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 FAAP100Q0VG06 881 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 RABL6Q3YEC7 729 aaPredicted RBP13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 C1orf53Q5VUE5 145 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 C16orf59Q7L2K0 433 aa13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 ZGPATQ8N5A5 531 aaKnown RBP13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 YBX2Q9Y2T7 364 aaKnown RBP13.75□□□□□ -0.21
CTNNA1-234ENST00000522227 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 EYA2O00167 538 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 CSF2RAP15509 400 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 ADORA2AP29274 412 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 ADORA1P30542 326 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 MECOMQ03112 1051 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 RAB30Q15771 203 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L2Q6R6M4 530 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 FEZ1Q99689 392 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 XPNPEP3Q9NQH7 507 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 PHF24Q9UPV7 400 aa13.74□□□□□ -0.21
CTNNA1-234ENST00000522227 GPR75-ASB3A0A0A6YYF3 556 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 DCDC2CA8MYV0 355 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 RFXAPO00287 272 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 TIMP1P01033 207 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 RABGGTBP53611 331 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 EXOSC9Q06265 439 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 PPIGQ13427 754 aaKnown RBP eCLIP13.73□□□□□ -0.212e-8■□□□□ 10.5
CTNNA1-234ENST00000522227 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 CRACR2BQ8N4Y2 399 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 PPP1R12CQ9BZL4 782 aa13.73□□□□□ -0.21
CTNNA1-234ENST00000522227 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 ERC2O15083 957 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 COBLO75128 1261 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 MYOGP15173 224 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 RASGRF1Q13972 1273 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 OLFML2BQ68BL8 750 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 ERICH6Q7L0X2 663 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 LENG1Q96BZ8 264 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 HERC5Q9UII4 1024 aaKnown RBP13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 ZBTB21Q9ULJ3 1066 aa13.72□□□□□ -0.21
CTNNA1-234ENST00000522227 SEMA3EO15041 775 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 TLL1O43897 1013 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 RARBP10826 455 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 CCDC102BQ68D86 513 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 KRT40Q6A162 431 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 MFSD5Q6N075 450 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 CCDC174Q6PII3 467 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 ATG9AQ7Z3C6 839 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 RNF180Q86T96 592 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 SH3RF3Q8TEJ3 882 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 ZNF384Q8TF68 577 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 PI4KBQ9UBF8 816 aa13.71□□□□□ -0.21
CTNNA1-234ENST00000522227 CACNA1FO60840 1977 aa13.71□□□□□ -0.22
CTNNA1-234ENST00000522227 IGHA2P01877 340 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 NHLH1Q02575 133 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 CATSPERGQ6ZRH7 1159 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 CD320Q9NPF0 282 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 STARD7Q9NQZ5 370 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 LRRC37A2A6NM11 1700 aa13.7□□□□□ -0.22
CTNNA1-234ENST00000522227 GBF1Q92538 1859 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms