RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 RBM12BQ8IXT5 1001 aaKnown RBP13.52□□□□□ -0.25
SPIDR-217ENST00000522117 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 MMTAG2Q9BU76 263 aaKnown RBP13.52□□□□□ -0.25
SPIDR-217ENST00000522117 POLD4Q9HCU8 107 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 RGL1Q9NZL6 768 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 TESPA1A2RU30 521 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-217ENST00000522117 A6NHS1 94 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 ZSCAN9O15535 394 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-217ENST00000522117 RANBP1P43487 201 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 LINC00301Q8NCQ3 95 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 BLOC1S6Q9UL45 172 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 FAM184BQ9ULE4 1060 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 CEMIPQ8WUJ3 1361 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 BUB1BO60566 1050 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-217ENST00000522117 PPFIA3O75145 1194 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 ELF3P78545 371 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-217ENST00000522117 CUL5Q93034 780 aa13.51□□□□□ -0.25
SPIDR-217ENST00000522117 LIN7AO14910 233 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 PPP1R37O75864 691 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 SCTRP47872 440 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 GCLCP48506 637 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 CD151P48509 253 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 PDE4BQ07343 736 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 POLA2Q14181 598 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 NBPF14Q5TI25 921 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 EMC10Q5UCC4 262 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 SND1Q7KZF4 910 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 PLEKHG4BQ96PX9 1271 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 NAA15Q9BXJ9 866 aaKnown RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 BIN2Q9UBW5 565 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 FAM107AO95990 144 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 NSUN7Q8NE18 718 aaKnown RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 MYO1AQ9UBC5 1043 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
SPIDR-217ENST00000522117 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 C3P01024 1663 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 TMEM2Q9UHN6 1383 aa13.5□□□□□ -0.25
SPIDR-217ENST00000522117 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 CTDNEP1O95476 244 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 ANP32DO95626 131 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 FERP16591 822 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 ZNF18P17022 549 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 IL13P35225 146 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 TSEN2Q8NCE0 465 aaKnown RBP13.49□□□□□ -0.25
SPIDR-217ENST00000522117 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
SPIDR-217ENST00000522117 FAM227BQ96M60 508 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 ALS2CR12Q96Q35 445 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 RANBP17Q9H2T7 1088 aaKnown RBP13.49□□□□□ -0.25
SPIDR-217ENST00000522117 PAPOLBQ9NRJ5 636 aaKnown RBP13.49□□□□□ -0.25
SPIDR-217ENST00000522117 HOOK1Q9UJC3 728 aaKnown RBP13.49□□□□□ -0.25
SPIDR-217ENST00000522117 SURF6O75683 361 aaKnown RBP13.49□□□□□ -0.25
SPIDR-217ENST00000522117 RNF8O76064 485 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 PFKFB1P16118 471 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 BLMHQ13867 455 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 LACTB2Q53H82 288 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-217ENST00000522117 ARPC5LQ9BPX5 153 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 HDAC6Q9UBN7 1215 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 MAP3K5Q99683 1374 aa13.49□□□□□ -0.25
SPIDR-217ENST00000522117 GLRX3O76003 335 aaKnown RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 GNAT1P11488 350 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 CDC27P30260 824 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 APBA1Q02410 837 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 NR1I3Q14994 352 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 SPECC1Q5M775 1068 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 MTHFD1LQ6UB35 978 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 CRELD2Q6UXH1 353 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 FAM81AQ8TBF8 368 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 CYFIP2Q96F07 1278 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 SEC62Q99442 399 aaKnown RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 KDRP35968 1356 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 DNAJC8O75937 253 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 NBPF7P0C2Y1 421 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 RBL2Q08999 1139 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 NNTQ13423 1086 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 ARHGAP22Q7Z5H3 698 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 LLPHQ9BRT6 129 aaKnown RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 SNRKQ9NRH2 765 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 BAIAP2L1Q9UHR4 511 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 MROH7-TTC4A0A0A0MT08 1334 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 A0A1B0GVG6 124 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-217ENST00000522117 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 ALS2CLQ60I27 953 aa13.48□□□□□ -0.25
SPIDR-217ENST00000522117 BMP6P22004 513 aa13.47□□□□□ -0.25
SPIDR-217ENST00000522117 NMIQ13287 307 aaPredicted RBP13.47□□□□□ -0.25
SPIDR-217ENST00000522117 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
SPIDR-217ENST00000522117 PNOCQ13519 176 aa13.47□□□□□ -0.25
SPIDR-217ENST00000522117 STK38Q15208 465 aa13.47□□□□□ -0.25
SPIDR-217ENST00000522117 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms