RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 USP17L24Q0WX57 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP6NLQ92738 828 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 ZNF512BQ96KM6 892 aaPredicted RBP18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 SERPINB13Q9UIV8 391 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 PLXNB2O15031 1838 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 GLRX3O76003 335 aaKnown RBP18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 MDM2Q00987 491 aaPredicted RBP18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 MAP2K5Q13163 448 aa18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 LRRC26Q2I0M4 334 aa18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 MFSD14CQ5VZR4 134 aa18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 POTEEQ6S8J3 1075 aa18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 RABGAP1Q9Y3P9 1069 aa18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 COL6A3P12111 3177 aa18.56■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CNMDO75829 334 aa18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CNGA1P29973 690 aa18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP14P54578 494 aa18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 ABCB5Q2M3G0 1257 aa18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CERKLQ49MI3 558 aaPredicted RBP18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 EDC3Q96F86 508 aaKnown RBP18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CABP5Q9NP86 173 aa18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 IVNS1ABPQ9Y6Y0 642 aa18.55■□□□□ 0.56
CSGALNACT1-204ENST00000517494 COL6A1P12109 1028 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 VCAM1P19320 739 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 MAP3K12Q12852 859 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 LHX8Q68G74 356 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 TATDN1Q6P1N9 297 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 TTC6Q86TZ1 520 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CERS3Q8IU89 383 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 ACER1Q8TDN7 264 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 C12orf42Q96LP6 360 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 ANTXR1Q9H6X2 564 aa18.54■□□□□ 0.56
CSGALNACT1-204ENST00000517494 IGSF3O75054 1194 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 ATP2B2Q01814 1243 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 LRIT3Q3SXY7 679 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CATSPERGQ6ZRH7 1159 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 AACSQ86V21 672 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 SENP6Q9GZR1 1112 aaPredicted RBP18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 BCL11AQ9H165 835 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 EHD4Q9H223 541 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 RPAP3Q9H6T3 665 aaPredicted RBP18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 FLRT1Q9NZU1 646 aa18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
CSGALNACT1-204ENST00000517494 SLC15A5A6NIM6 579 aa18.52■□□□□ 0.56
CSGALNACT1-204ENST00000517494 MPHOSPH10O00566 681 aaKnown RBP18.52■□□□□ 0.56
CSGALNACT1-204ENST00000517494 PTPREP23469 700 aa18.52■□□□□ 0.56
CSGALNACT1-204ENST00000517494 GPR153Q6NV75 609 aa18.52■□□□□ 0.56
CSGALNACT1-204ENST00000517494 KIAA1683Q9H0B3 1180 aa18.52■□□□□ 0.56
CSGALNACT1-204ENST00000517494 BTBD7Q9P203 1132 aa18.52■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CDK5RAP2Q96SN8 1893 aa18.52■□□□□ 0.55
CSGALNACT1-204ENST00000517494 FOCADQ5VW36 1801 aa18.51■□□□□ 0.55
CSGALNACT1-204ENST00000517494 CYP2C19P33261 490 aa18.51■□□□□ 0.55
CSGALNACT1-204ENST00000517494 PLCD1P51178 756 aa18.51■□□□□ 0.55
CSGALNACT1-204ENST00000517494 ATN1P54259 1190 aaPredicted RBP18.51■□□□□ 0.55
CSGALNACT1-204ENST00000517494 LBHD1Q9BQE6 289 aaPredicted RBP18.51■□□□□ 0.55
CSGALNACT1-204ENST00000517494 DDX20Q9UHI6 824 aaKnown RBP18.51■□□□□ 0.55
CSGALNACT1-204ENST00000517494 EXOC6BQ9Y2D4 811 aa18.51■□□□□ 0.55
CSGALNACT1-204ENST00000517494 MAGEB6P1A0A0J9YX57 407 aa18.5■□□□□ 0.55
CSGALNACT1-204ENST00000517494 SPDYE16A6NNV3 312 aaPredicted RBP18.5■□□□□ 0.55
CSGALNACT1-204ENST00000517494 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
CSGALNACT1-204ENST00000517494 SHMT1P34896 483 aa18.5■□□□□ 0.55
CSGALNACT1-204ENST00000517494 SEPT2Q15019 361 aa18.5■□□□□ 0.55
CSGALNACT1-204ENST00000517494 TANGO6Q9C0B7 1094 aa18.5■□□□□ 0.55
CSGALNACT1-204ENST00000517494 MYO5AQ9Y4I1 1855 aaKnown RBP18.5■□□□□ 0.55
CSGALNACT1-204ENST00000517494 RLBP1P12271 317 aa18.49■□□□□ 0.55
CSGALNACT1-204ENST00000517494 GRB14Q14449 540 aa18.49■□□□□ 0.55
CSGALNACT1-204ENST00000517494 DPP9Q86TI2 863 aa18.49■□□□□ 0.55
CSGALNACT1-204ENST00000517494 NPLOC4Q8TAT6 608 aa18.49■□□□□ 0.55
CSGALNACT1-204ENST00000517494 IL1RAPL2Q9NP60 686 aa18.49■□□□□ 0.55
CSGALNACT1-204ENST00000517494 STXBP5LQ9Y2K9 1186 aa18.49■□□□□ 0.55
CSGALNACT1-204ENST00000517494 MSCO60682 206 aa18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 SAMD1Q6SPF0 538 aaPredicted RBP18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 ERC1Q8IUD2 1116 aa18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 RIOK1Q9BRS2 568 aaKnown RBP18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 CRNKL1Q9BZJ0 848 aaKnown RBP18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 MTMR10Q9NXD2 777 aa18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 MCM9Q9NXL9 1143 aa18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 PRKAG2Q9UGJ0 569 aa18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 A0A0C4DFX4 3053 aa18.48■□□□□ 0.55
CSGALNACT1-204ENST00000517494 APBB1O00213 710 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 GUCY1A2P33402 732 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 EVX2Q03828 476 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 SLC9C2Q5TAH2 1124 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 ANO1Q5XXA6 986 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 LBX2Q6XYB7 198 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 LPAR1Q92633 364 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 DNAJC2Q99543 621 aaKnown RBP18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 ATP11BQ9Y2G3 1177 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 MYH1P12882 1939 aa18.47■□□□□ 0.55
CSGALNACT1-204ENST00000517494 DNM1LO00429 736 aa18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 HOXC6P09630 235 aa18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 ADORA2AP29274 412 aa18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 PLS1Q14651 629 aa18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 TTF1Q15361 905 aaPredicted RBP18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 GJC2Q5T442 439 aaPredicted RBP18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 TRPV1Q8NER1 839 aa18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 FAM161BQ96MY7 647 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms