RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 KDRP35968 1356 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 DEXIO95424 95 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 PEX19P40855 299 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 RAB11FIP4Q86YS3 637 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 CEP120Q8N960 986 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 NKIRAS1Q9NYS0 192 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 MAP7Q14244 749 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 PPP2R5AQ15172 486 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 GNPTABQ3T906 1256 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 EFCAB13Q8IY85 973 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 GBP5Q96PP8 586 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 PCP11498 1178 aaKnown RBP13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 PLCD1P51178 756 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 CCDC122Q5T0U0 273 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 SREK1Q8WXA9 508 aaKnown RBP13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 CROCCP2Q86T23 111 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 SUCLG2Q96I99 432 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 KCNK9Q9NPC2 374 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 EXOC7Q9UPT5 735 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 GPAA1O43292 621 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 G2E3Q7L622 706 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 CCDC65Q8IXS2 484 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 IGSF1Q8N6C5 1336 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 SLC8A3P57103 927 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 KRT25Q7Z3Z0 450 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 NPR1P16066 1061 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 IQUBQ8NA54 791 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 CBX8Q9HC52 389 aa13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 AATFQ9NY61 560 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCDHGA6-201ENST00000517434 TAF5LO75529 589 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 LUC7L3O95232 432 aaKnown RBP13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 ATP5DP30049 168 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 RILPL1Q5EBL4 403 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 C8orf74Q6P047 294 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 RNF10Q8N5U6 811 aaKnown RBP13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 UBLCP1Q8WVY7 318 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 ARMT1Q9H993 441 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 MED4Q9NPJ6 270 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 ZMYM4Q5VZL5 1548 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 A0A087WUV0 522 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 SNX16P57768 344 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 ICE2Q659A1 982 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 NT5C2P49902 561 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 ANGEL1Q9UNK9 670 aaKnown RBP13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 SMIM23A6NLE4 172 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 PHLDB2Q86SQ0 1253 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 VSIG1Q86XK7 387 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 IFT20Q8IY31 132 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 TTLL6Q8N841 843 aa13.62□□□□□ -0.23
PCDHGA6-201ENST00000517434 MAP3K4Q9Y6R4 1608 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 CASQ2O14958 399 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 RIPOR2Q9Y4F9 1068 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 ZNF804BA4D1E1 1349 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 CETN3O15182 167 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 ATP5JP18859 108 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 NSMFQ6X4W1 530 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 CLSTN2Q9H4D0 955 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 SSX2IPQ9Y2D8 614 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 ABCC3O15438 1527 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 EFCAB8A8MWE9 144 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 HIP1RO75146 1068 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 CHMLP26374 656 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 AFMP43652 599 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 MCF2L2Q86YR7 1114 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 ARHGAP24Q8N264 748 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 OVOS2A0A0J9YW53 1432 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 OVOS2Q6IE36 1432 aa13.61□□□□□ -0.23
PCDHGA6-201ENST00000517434 BCAS4Q8TDM0 211 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 USP26Q9BXU7 913 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
PCDHGA6-201ENST00000517434 ADCY7P51828 1080 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms