RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.01■□□□□ 0.79
SNX2-213ENST00000514949 SLFN14P0C7P3 912 aa20■□□□□ 0.79
SNX2-213ENST00000514949 PLCD1P51178 756 aa20■□□□□ 0.79
SNX2-213ENST00000514949 REXO1L1PQ8IX06 675 aa20■□□□□ 0.79
SNX2-213ENST00000514949 MED15Q96RN5 788 aa20■□□□□ 0.79
SNX2-213ENST00000514949 BAZ2AQ9UIF9 1905 aaKnown RBP20■□□□□ 0.79
SNX2-213ENST00000514949 SPATA31A5Q5VU36 1347 aa20■□□□□ 0.79
SNX2-213ENST00000514949 SPATA31A7Q8IWB4 1347 aa20■□□□□ 0.79
SNX2-213ENST00000514949 SPECC1LQ69YQ0 1117 aa20■□□□□ 0.79
SNX2-213ENST00000514949 CTR9Q6PD62 1173 aa20■□□□□ 0.79
SNX2-213ENST00000514949 C3orf67Q6ZVT6 689 aa20■□□□□ 0.79
SNX2-213ENST00000514949 USP49Q70CQ1 688 aa20■□□□□ 0.79
SNX2-213ENST00000514949 CASZ1Q86V15 1759 aa20■□□□□ 0.79
SNX2-213ENST00000514949 SMIM22K7EJ46 135 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 ZSCAN12O43309 604 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 STX10O60499 249 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 NPY5RQ15761 445 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 TMTC3Q6ZXV5 915 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 VPS54Q9P1Q0 977 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 DMTNQ08495 405 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 NR1I3Q14994 352 aa19.99■□□□□ 0.79
SNX2-213ENST00000514949 NSUN4Q96CB9 384 aaKnown RBP19.99■□□□□ 0.79
SNX2-213ENST00000514949 V9GY48 417 aaPredicted RBP19.99■□□□□ 0.79
SNX2-213ENST00000514949 GOLGA6L9A6NEM1 432 aa19.98■□□□□ 0.79
SNX2-213ENST00000514949 NT5C2P49902 561 aa19.98■□□□□ 0.79
SNX2-213ENST00000514949 DYNLL1P63167 89 aaKnown RBP19.98■□□□□ 0.79
SNX2-213ENST00000514949 KMT5BQ4FZB7 885 aa19.98■□□□□ 0.79
SNX2-213ENST00000514949 EARS2Q5JPH6 523 aaKnown RBP19.98■□□□□ 0.79
SNX2-213ENST00000514949 GTPBP4Q9BZE4 634 aaKnown RBP19.98■□□□□ 0.79
SNX2-213ENST00000514949 FAM53CQ9NYF3 392 aa19.98■□□□□ 0.79
SNX2-213ENST00000514949 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.98■□□□□ 0.79
SNX2-213ENST00000514949 A0A1B0GTH6 734 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 SPDYE4A6NLX3 237 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 PLEKHA8P1O95397 391 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 TC2NQ8N9U0 490 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 SRRTQ9BXP5 876 aaKnown RBP19.97■□□□□ 0.79
SNX2-213ENST00000514949 BCL11BQ9C0K0 894 aaPredicted RBP19.97■□□□□ 0.79
SNX2-213ENST00000514949 BRMS1Q9HCU9 246 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 WTIPA6NIX2 430 aaPredicted RBP19.97■□□□□ 0.79
SNX2-213ENST00000514949 TRAPPC10P48553 1259 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 HOMER1Q86YM7 354 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 GSDMAQ96QA5 445 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 CNTNAP5Q8WYK1 1306 aa19.97■□□□□ 0.79
SNX2-213ENST00000514949 TAF1P21675 1872 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 A0A087X0B3 334 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 FAM205CA6NFA0 338 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 IGSF3O75054 1194 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 CDK11BP21127 795 aaKnown RBP19.96■□□□□ 0.79
SNX2-213ENST00000514949 ELF2Q15723 593 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 SBK1Q52WX2 424 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 APTXQ7Z2E3 356 aaKnown RBP19.96■□□□□ 0.79
SNX2-213ENST00000514949 GRAMD1CQ8IYS0 662 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 PDILTQ8N807 584 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 PAGE5Q96GU1 130 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 BAG1Q99933 345 aaPredicted RBP19.96■□□□□ 0.79
SNX2-213ENST00000514949 ATP8A2Q9NTI2 1148 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 PRDM4Q9UKN5 801 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 CYP2D7A0A087X1C5 515 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 USP17L12C9JPN9 530 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 USP17L21D6R901 530 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 ATP2C1P98194 919 aaPredicted RBP19.96■□□□□ 0.79
SNX2-213ENST00000514949 CUL4BQ13620 913 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 PPP2R2CQ9Y2T4 447 aa19.96■□□□□ 0.79
SNX2-213ENST00000514949 CNTNAP4Q9C0A0 1308 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 LAMB1P07942 1786 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 H2AFXP16104 143 aaPredicted RBP19.95■□□□□ 0.78
SNX2-213ENST00000514949 ATP2B1P20020 1258 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 DPYDQ12882 1025 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 ZNF827Q17R98 1081 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 SPATA1Q5VX52 437 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 FBXO38Q6PIJ6 1188 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 SYMPKQ92797 1274 aaKnown RBP19.95■□□□□ 0.78
SNX2-213ENST00000514949 CELF1Q92879 486 aaKnown RBP19.95■□□□□ 0.78
SNX2-213ENST00000514949 EPSTI1Q96J88 318 aa19.95■□□□□ 0.78
SNX2-213ENST00000514949 LINC00116Q8NCU8 138 aa19.94■□□□□ 0.78
SNX2-213ENST00000514949 DHX58Q96C10 678 aa19.94■□□□□ 0.78
SNX2-213ENST00000514949 PYM1Q9BRP8 204 aaKnown RBP19.94■□□□□ 0.78
SNX2-213ENST00000514949 DCP1AQ9NPI6 582 aaPredicted RBP19.94■□□□□ 0.78
SNX2-213ENST00000514949 SAMSN1Q9NSI8 373 aaKnown RBP19.94■□□□□ 0.78
SNX2-213ENST00000514949 DNAI1Q9UI46 699 aa19.94■□□□□ 0.78
SNX2-213ENST00000514949 VWA3AA6NCI4 1184 aa19.94■□□□□ 0.78
SNX2-213ENST00000514949 MECOMQ03112 1051 aa19.94■□□□□ 0.78
SNX2-213ENST00000514949 CDKAL1Q5VV42 579 aa19.94■□□□□ 0.78
SNX2-213ENST00000514949 SRBD1Q8N5C6 995 aaKnown RBP19.94■□□□□ 0.78
SNX2-213ENST00000514949 CRNKL1Q9BZJ0 848 aaKnown RBP19.94■□□□□ 0.78
SNX2-213ENST00000514949 MAST2Q6P0Q8 1798 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 PRDM1O75626 825 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 RPS8P62241 208 aaKnown RBP19.93■□□□□ 0.78
SNX2-213ENST00000514949 TTC38Q5R3I4 469 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 TRMT44Q8IYL2 757 aaKnown RBP19.93■□□□□ 0.78
SNX2-213ENST00000514949 CTCFLQ8NI51 663 aaPredicted RBP19.93■□□□□ 0.78
SNX2-213ENST00000514949 ANKRD2Q9GZV1 360 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 ARPP21Q9UBL0 812 aaPredicted RBP19.93■□□□□ 0.78
SNX2-213ENST00000514949 A0A0G2JS52 829 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 FANCGO15287 622 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 PANX2Q96RD6 677 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 NYXQ9GZU5 481 aa19.93■□□□□ 0.78
SNX2-213ENST00000514949 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNX2-213ENST00000514949 V9GYY5 206 aaPredicted RBP19.93■□□□□ 0.78
SNX2-213ENST00000514949 MYH13Q9UKX3 1938 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms