RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ZNF185	O15231	689 aa		12.52	□□□□□ -0.41
PDCD6-210	ENST00000513582	ERCC3	P19447	782 aa		12.52	□□□□□ -0.41
PDCD6-210	ENST00000513582	AMPD2	Q01433	879 aa		12.52	□□□□□ -0.41
PDCD6-210	ENST00000513582	AKAP4	Q5JQC9	854 aa		12.52	□□□□□ -0.41
PDCD6-210	ENST00000513582	AIFM3	Q96NN9	605 aa		12.52	□□□□□ -0.41
PDCD6-210	ENST00000513582	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZNF18	P17022	549 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	CCT6A	P40227	531 aa	Known RBP	12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	TBC1D31	Q96DN5	1066 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	KCNH3	Q9ULD8	1083 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	MFAP3L	O75121	409 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	ERVK-24	P63145	666 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	SLC39A14	Q15043	492 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	C11orf91	Q3C1V1	193 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	NAA35	Q5VZE5	725 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	MICALCL	Q6ZW33	695 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	MYL10	Q9BUA6	226 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	VCPKMT	Q9H867	229 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	MYH15	Q9Y2K3	1946 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	ITSN1	Q15811	1721 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	IGSF1	Q8N6C5	1336 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	SMTN	P53814	917 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	APBA1	Q02410	837 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	TTMP	Q5BVD1	217 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	WLS	Q5T9L3	541 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZNF790	Q6PG37	636 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	PI16	Q6UXB8	463 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	NUP88	Q99567	741 aa	Predicted RBP	12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	NAA15	Q9BXJ9	866 aa	Known RBP	12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	SAR1B	Q9Y6B6	198 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	RIMBP3C	A6NJZ7	1639 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	RIMBP3B	A6NNM3	1639 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	RIMBP3	Q9UFD9	1639 aa		12.51	□□□□□ -0.41
PDCD6-210	ENST00000513582	NAP1L1	P55209	391 aa	Known RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	EZH2	Q15910	746 aa	Known RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	AP1AR	Q63HQ0	302 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	PARP9	Q8IXQ6	854 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	FAM89A	Q96GI7	184 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	SH3GL2	Q99962	352 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	OVOS2	A0A0J9YW53	1432 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	OVOS2	Q6IE36	1432 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	ENO4	A6NNW6	628 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	MYO1B	O43795	1136 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	AP1G2	O75843	785 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	KRT14	P02533	472 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	HMGB1	P09429	215 aa	Known RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	HDLBP	Q00341	1268 aa	Known RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	SLC7A5	Q01650	507 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	TRIM29	Q14134	588 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZNF483	Q8TF39	744 aa	Predicted RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	HDAC7	Q8WUI4	952 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	SPDL1	Q96EA4	605 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	MED15	Q96RN5	788 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	HAUS2	Q9NVX0	235 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	KLF18	A0A0U1RQI7	1052 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	GOLGA8K	D6RF30	607 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	RASSF9	O75901	435 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	CDC25C	P30307	473 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	MRPL12	P52815	198 aa	Known RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	KIF23	Q02241	960 aa	Predicted RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	MCMDC2	Q4G0Z9	681 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	BRAP	Q7Z569	592 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	AIDA	Q96BJ3	306 aa		12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.5	□□□□□ -0.41
PDCD6-210	ENST00000513582		A0A1B0GTH6	734 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582		E7EWF7	191 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	MPHOSPH10	O00566	681 aa	Known RBP	12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	GYPC	P04921	128 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	METTL24	Q5JXM2	366 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	CYB5D1	Q6P9G0	228 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	TRAPPC11	Q7Z392	1133 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZNF473	Q8WTR7	871 aa	Known RBP	12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	HPSE	Q9Y251	543 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	OPLAH	O14841	1288 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	LSP1	P33241	339 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	POSTN	Q15063	836 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	BICDL1	Q6ZP65	573 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	FAM228A	Q86W67	206 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	ARMC2	Q8NEN0	867 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZBTB10	Q96DT7	871 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	RNPC3	Q96LT9	517 aa	Known RBP	12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	ZKSCAN3	Q9BRR0	538 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	JADE2	Q9NQC1	790 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	ABCF2	Q9UG63	623 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	DBNL	Q9UJU6	430 aa	Known RBP	12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	WWC3	Q9ULE0	1092 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	MON2	Q7Z3U7	1717 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	GOLGA6L7	A0A1B0GV03	622 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	OPA1	O60313	960 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	RTN2	O75298	545 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	AMOT	Q4VCS5	1084 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	TTLL7	Q6ZT98	887 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	ENOX1	Q8TC92	643 aa	Known RBP	12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	PARD3B	Q8TEW8	1205 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	JAKMIP2	Q96AA8	810 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	FAM184B	Q9ULE4	1060 aa		12.49	□□□□□ -0.41
PDCD6-210	ENST00000513582	USP31	Q70CQ4	1352 aa		12.48	□□□□□ -0.41
PDCD6-210	ENST00000513582	RNF225	M0QZC1	329 aa	Predicted RBP	12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 846.9 ms