RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 CNPY4Q8N129 248 aa16.74■□□□□ 0.27
DDR1-271ENST00000513240 CCAR2Q8N163 923 aaKnown RBP16.74■□□□□ 0.27
DDR1-271ENST00000513240 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
DDR1-271ENST00000513240 SAMSN1Q9NSI8 373 aaKnown RBP16.74■□□□□ 0.27
DDR1-271ENST00000513240 ATL3Q6DD88 541 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 TMCO3Q6UWJ1 677 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 PACS2Q86VP3 889 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
DDR1-271ENST00000513240 DYNLL2Q96FJ2 89 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 BLZF1Q9H2G9 400 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 SFPQP23246 707 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDR1-271ENST00000513240 LMAN1P49257 510 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 AKAP17AQ02040 695 aaKnown RBP16.73■□□□□ 0.27
DDR1-271ENST00000513240 FBXL16Q8N461 479 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 BANK1Q8NDB2 785 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 KRT23Q9C075 422 aa16.73■□□□□ 0.27
DDR1-271ENST00000513240 PARP4Q9UKK3 1724 aaKnown RBP16.72■□□□□ 0.27
DDR1-271ENST00000513240 RESP18Q5W5W9 173 aa16.72■□□□□ 0.27
DDR1-271ENST00000513240 USP17L8P0C7I0 530 aa16.72■□□□□ 0.27
DDR1-271ENST00000513240 GPS2Q13227 327 aa16.72■□□□□ 0.27
DDR1-271ENST00000513240 GRIK5Q16478 980 aa16.72■□□□□ 0.27
DDR1-271ENST00000513240 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
DDR1-271ENST00000513240 SGMS1Q86VZ5 419 aa16.72■□□□□ 0.27
DDR1-271ENST00000513240 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
DDR1-271ENST00000513240 IFNAR1P17181 557 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
DDR1-271ENST00000513240 CWC15Q9P013 229 aaKnown RBP16.71■□□□□ 0.27
DDR1-271ENST00000513240 UBR2Q8IWV8 1755 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 ANKRD65E5RJM6 399 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 SLC44A5Q8NCS7 719 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 ZNF512BQ96KM6 892 aaPredicted RBP16.71■□□□□ 0.27
DDR1-271ENST00000513240 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 DESI2Q9BSY9 194 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 SPATA31A1Q5TZJ5 1347 aa16.71■□□□□ 0.27
DDR1-271ENST00000513240 A0A0U1RQJ8 604 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 VWA3AA6NCI4 1184 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 ZRANB2O95218 330 aaKnown RBP eCLIP16.71■□□□□ 0.26
DDR1-271ENST00000513240 LIFRP42702 1097 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 MECOMQ03112 1051 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 TTC31Q49AM3 519 aaPredicted RBP16.71■□□□□ 0.26
DDR1-271ENST00000513240 OLFM4Q6UX06 510 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 GOLGA6L1Q8N7Z2 621 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 ATRIPQ8WXE1 791 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 SAP30BPQ9UHR5 308 aaKnown RBP16.71■□□□□ 0.26
DDR1-271ENST00000513240 HPSEQ9Y251 543 aa16.71■□□□□ 0.26
DDR1-271ENST00000513240 GNPATO15228 680 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 STAG1Q8WVM7 1258 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 MED15Q96RN5 788 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 FBXO2Q9UK22 296 aaPredicted RBP16.7■□□□□ 0.26
DDR1-271ENST00000513240 NFE2L3Q9Y4A8 694 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 SASH3O75995 380 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 NBPF5PQ86XG9 351 aaPredicted RBP16.7■□□□□ 0.26
DDR1-271ENST00000513240 JMYQ8N9B5 988 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 PPP1R13BQ96KQ4 1090 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 INTS13Q9NVM9 706 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 DNAI1Q9UI46 699 aa16.7■□□□□ 0.26
DDR1-271ENST00000513240 GOLGA8HP0CJ92 632 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 MCM7P33993 719 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 ZSCAN10Q96SZ4 725 aaPredicted RBP16.69■□□□□ 0.26
DDR1-271ENST00000513240 CDC5LQ99459 802 aaKnown RBP16.69■□□□□ 0.26
DDR1-271ENST00000513240 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
DDR1-271ENST00000513240 CDC25BP30305 580 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 MYL5Q02045 173 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 POSTNQ15063 836 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 PKN1Q16512 942 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 PIK3AP1Q6ZUJ8 805 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 ESR2Q92731 530 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
DDR1-271ENST00000513240 CAVIN2O95810 425 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 MTF1Q14872 753 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 ALX1Q15699 326 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 REXO1L1PQ8IX06 675 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 IRX2Q9BZI1 471 aaPredicted RBP16.68■□□□□ 0.26
DDR1-271ENST00000513240 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 MCM9Q9NXL9 1143 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 COL1A1P02452 1464 aaPredicted RBP16.68■□□□□ 0.26
DDR1-271ENST00000513240 CUTAO60888 179 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 SRBD1Q8N5C6 995 aaKnown RBP16.68■□□□□ 0.26
DDR1-271ENST00000513240 ZSWIM4Q9H7M6 989 aa16.68■□□□□ 0.26
DDR1-271ENST00000513240 USP17L3A6NCW0 530 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 USP17L4A6NCW7 530 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 TEX33O43247 280 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 PPP6R2O75170 966 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 KARSQ15046 597 aaKnown RBP16.67■□□□□ 0.26
DDR1-271ENST00000513240 USP17L1Q7RTZ2 530 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 DNAJC5Q9H3Z4 198 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 ARGLU1Q9NWB6 273 aaPredicted RBP16.67■□□□□ 0.26
DDR1-271ENST00000513240 DEXIO95424 95 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 TOP1P11387 765 aaKnown RBP16.67■□□□□ 0.26
DDR1-271ENST00000513240 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
DDR1-271ENST00000513240 SEC23AQ15436 765 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 FOXR1Q6PIV2 292 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 STAG2Q8N3U4 1231 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 GOLGA5Q8TBA6 731 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms