RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 USP17L10C9JJH3 530 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 BCRP11274 1271 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 RASA1P20936 1047 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 TDO2P48775 406 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 CTDSPL2Q05D32 466 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 PROCA1Q8NCQ7 364 aaPredicted RBP16.24■□□□□ 0.19
SNF8-206ENST00000509989 AS3MTQ9HBK9 375 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
SNF8-206ENST00000509989 HELLSQ9NRZ9 838 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 ARPP21Q9UBL0 812 aaPredicted RBP16.24■□□□□ 0.19
SNF8-206ENST00000509989 TRIM17Q9Y577 477 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
SNF8-206ENST00000509989 GIMAP6Q6P9H5 292 aa16.23■□□□□ 0.19
SNF8-206ENST00000509989 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
SNF8-206ENST00000509989 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
SNF8-206ENST00000509989 CABP5Q9NP86 173 aa16.23■□□□□ 0.19
SNF8-206ENST00000509989 SWAP70Q9UH65 585 aa16.23■□□□□ 0.19
SNF8-206ENST00000509989 PLXNB2O15031 1838 aa16.23■□□□□ 0.19
SNF8-206ENST00000509989 COL11A1P12107 1806 aaPredicted RBP16.22■□□□□ 0.19
SNF8-206ENST00000509989 LAMA4Q16363 1823 aa16.22■□□□□ 0.19
SNF8-206ENST00000509989 GNAT2P19087 354 aa16.22■□□□□ 0.19
SNF8-206ENST00000509989 LACTBP83111 547 aaPredicted RBP16.22■□□□□ 0.19
SNF8-206ENST00000509989 PPARAQ07869 468 aa16.22■□□□□ 0.19
SNF8-206ENST00000509989 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
SNF8-206ENST00000509989 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
SNF8-206ENST00000509989 GINM1Q9NU53 330 aa16.22■□□□□ 0.19
SNF8-206ENST00000509989 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
SNF8-206ENST00000509989 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
SNF8-206ENST00000509989 USP17L2Q6R6M4 530 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 DDRGK1Q96HY6 314 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 TRIM47Q96LD4 638 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 PARK7Q99497 189 aaKnown RBP16.21■□□□□ 0.19
SNF8-206ENST00000509989 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 NAPBQ9H115 298 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 TXNRD2Q9NNW7 524 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 SLC45A1Q9Y2W3 748 aa16.21■□□□□ 0.19
SNF8-206ENST00000509989 CCDC171Q6TFL3 1326 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 C19orf81C9J6K1 198 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 FGAP02671 866 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 EEF2P13639 858 aaKnown RBP16.2■□□□□ 0.18
SNF8-206ENST00000509989 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 ERO1AQ96HE7 468 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 FEZ1Q99689 392 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 KIAA1683Q9H0B3 1180 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 TMOD4Q9NZQ9 345 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 HPS5Q9UPZ3 1129 aa16.2■□□□□ 0.18
SNF8-206ENST00000509989 CCDC85CA6NKD9 419 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 VCAM1P19320 739 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 HAND2P61296 217 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 ICA1Q05084 483 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 AMOTL1Q8IY63 956 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 C12orf42Q96LP6 360 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNF8-206ENST00000509989 PTCH2Q9Y6C5 1203 aa16.19■□□□□ 0.18
SNF8-206ENST00000509989 CENPFP49454 3210 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 IGKV6D-41A0A0C4DH26 115 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 CNMDO75829 334 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 HOXA7P31268 230 aaPredicted RBP16.18■□□□□ 0.18
SNF8-206ENST00000509989 PSMC4P43686 418 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 ATP2B2Q01814 1243 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 Q3C1V9 767 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 SMCR8Q8TEV9 937 aaPredicted RBP16.18■□□□□ 0.18
SNF8-206ENST00000509989 RPAP3Q9H6T3 665 aaPredicted RBP16.18■□□□□ 0.18
SNF8-206ENST00000509989 MKNK2Q9HBH9 465 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 RBPJLQ9UBG7 517 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 GABRQQ9UN88 632 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 A0A0G2JMZ2 1700 aa16.18■□□□□ 0.18
SNF8-206ENST00000509989 NMT2O60551 498 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 OSBPP22059 807 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 HERVK_113P62684 666 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 ALX1Q15699 326 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 FBXO46Q6PJ61 603 aaPredicted RBP16.17■□□□□ 0.18
SNF8-206ENST00000509989 RASGRP2Q7LDG7 609 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 CCDC17Q96LX7 622 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 NACAP1Q9BZK3 213 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 DIAPH3Q9NSV4 1193 aa16.17■□□□□ 0.18
SNF8-206ENST00000509989 CHMLP26374 656 aa16.16■□□□□ 0.18
SNF8-206ENST00000509989 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
SNF8-206ENST00000509989 CENPQQ7L2Z9 268 aaPredicted RBP16.16■□□□□ 0.18
SNF8-206ENST00000509989 TBC1D10CQ8IV04 446 aa16.16■□□□□ 0.18
SNF8-206ENST00000509989 CEP95Q96GE4 821 aa16.16■□□□□ 0.18
SNF8-206ENST00000509989 NUP88Q99567 741 aaPredicted RBP16.16■□□□□ 0.18
SNF8-206ENST00000509989 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
SNF8-206ENST00000509989 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
SNF8-206ENST00000509989 TFAP4Q01664 338 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 PTH1RQ03431 593 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 PAGR1Q9BTK6 254 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 IL17RBQ9NRM6 502 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 FBXO28Q9NVF7 368 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 ANAPC4Q9UJX5 808 aa16.15■□□□□ 0.18
SNF8-206ENST00000509989 ZNFX1Q9P2E3 1918 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms