RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ATE1O95260 518 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 MT-CO1P00395 513 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 TP53P04637 393 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 PF4V1P10720 104 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 RHOQP17081 205 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 PLCG1P19174 1290 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 HALP42357 657 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 IL2P60568 153 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 PTPN11Q06124 597 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 PCDH1Q08174 1060 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 STK3Q13188 491 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 BIRC3Q13489 604 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 CNGB1Q14028 1251 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 DHCR24Q15392 516 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 TMEM95Q3KNT9 176 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 FAM83BQ5T0W9 1011 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 OVOS1Q6IE37 1185 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 NLRC3Q7RTR2 1065 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 BRAPQ7Z569 592 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 LRRN4CLQ8ND94 238 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 DDX54Q8TDD1 881 aaKnown RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 PARD3BQ8TEW8 1205 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 USP33Q8TEY7 942 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 NXPE3Q969Y0 559 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 RUNDC1Q96C34 613 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 SARGQ9BW04 601 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 TRIM8Q9BZR9 551 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZC3H12CQ9C0D7 883 aaKnown RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 MUC3BQ9H195 1237 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 CLEC4MQ9H2X3 399 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 IGFLR1Q9H665 355 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 C11orf16Q9NQ32 467 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 ARHGEF4Q9NR80 690 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 GTF2A1LQ9UNN4 478 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 CORINQ9Y5Q5 1042 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 SCINQ9Y6U3 715 aa4.52□□□□□ -1.69
HMGB1P22-201ENST00000505315 A0A1B0GTH6 734 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 APAF1O14727 1248 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 NBNO60934 754 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ABLIM3O94929 683 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 UPP2O95045 317 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 NPTXRO95502 500 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 NME1P15531 152 aaKnown RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 RAG1P15918 1043 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ID4P47928 161 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 DGKGP49619 791 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 PPP2R2AP63151 447 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 MLLT1Q03111 559 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 TBC1D8BQ0IIM8 1120 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 GRB10Q13322 594 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZNF460Q14592 562 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 SAFBQ15424 915 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 BBS9Q3SYG4 887 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 WIPI1Q5MNZ9 446 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 HEATR6Q6AI08 1181 aaKnown RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 HFE2Q6ZVN8 426 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ADAT2Q7Z6V5 191 aaKnown RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 SKAP1Q86WV1 359 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 IFNL2Q8IZJ0 200 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 MICALL1Q8N3F8 863 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 CEP120Q8N960 986 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 TMEM102Q8N9M5 508 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ACRBPQ8NEB7 543 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 STK35Q8TDR2 534 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 FBXO41Q8TF61 875 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 TRIM63Q969Q1 353 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 GAL3ST3Q96A11 431 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ATG4CQ96DT6 458 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 NEUROD6Q96NK8 337 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 CAMKK2Q96RR4 588 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 SLC9A7Q96T83 725 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 INO80BQ9C086 356 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 BHLHE41Q9C0J9 482 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 PLCB1Q9NQ66 1216 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 JADE2Q9NQC1 790 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 TLR7Q9NYK1 1049 aaKnown RBP4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 GMIPQ9P107 970 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 LUZP4Q9P127 313 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZFATQ9P243 1243 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 REV1Q9UBZ9 1251 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZBTB21Q9ULJ3 1066 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 ANKRD6Q9Y2G4 727 aa4.51□□□□□ -1.69
HMGB1P22-201ENST00000505315 MEIS3P2A8K0S8 358 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 SPATA31C2B4DYI2 1134 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 NOP56O00567 594 aaKnown RBP4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 WNT7AO00755 349 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 ST18O60284 1047 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 IL33O95760 270 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 GHRHP01286 108 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 ASLP04424 464 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 PGRP06401 933 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 ACRP10323 421 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 PABPC1P11940 636 aaKnown RBP4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 IGFALSP35858 605 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 CDK8P49336 464 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 ADCY1Q08828 1119 aa4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 SFSWAPQ12872 951 aaKnown RBP4.5□□□□□ -1.69
HMGB1P22-201ENST00000505315 GRM3Q14832 879 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms