RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 CRHR2Q13324 411 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 EXOC6Q8TAG9 804 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 HOOK2Q96ED9 719 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 ABHD8Q96I13 439 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 HAUS7Q99871 368 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 SAP30BPQ9UHR5 308 aaKnown RBP9.73□□□□□ -0.85
RFC1-207ENST00000504554 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 ZNF532Q9HCE3 1301 aa9.73□□□□□ -0.85
RFC1-207ENST00000504554 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
RFC1-207ENST00000504554 CASP8AP2Q9UKL3 1982 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 BAG3O95817 575 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 PTPRAP18433 802 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 GTF2A2P52657 109 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 MAP3K12Q12852 859 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 DGKZQ13574 1117 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 SLC9C2Q5TAH2 1124 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 SCYL3Q8IZE3 742 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 LCORLQ8N3X6 602 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.72□□□□□ -0.85
RFC1-207ENST00000504554 PAG1Q9NWQ8 432 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 DAXXQ9UER7 740 aaPredicted RBP9.72□□□□□ -0.85
RFC1-207ENST00000504554 KCNH4Q9UQ05 1017 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 LAMB1P07942 1786 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
RFC1-207ENST00000504554 DOCK2Q92608 1830 aa9.71□□□□□ -0.85
RFC1-207ENST00000504554 SMIM22K7EJ46 135 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 IGSF3O75054 1194 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 ALDH1A1P00352 501 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 ADD2P35612 726 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 SNAPC2Q13487 334 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 TTF1Q15361 905 aaPredicted RBP9.71□□□□□ -0.86
RFC1-207ENST00000504554 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
RFC1-207ENST00000504554 NOM1Q5C9Z4 860 aaKnown RBP9.71□□□□□ -0.86
RFC1-207ENST00000504554 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 METTL16Q86W50 562 aaKnown RBP9.71□□□□□ -0.86
RFC1-207ENST00000504554 NOL10Q9BSC4 688 aaKnown RBP9.71□□□□□ -0.86
RFC1-207ENST00000504554 AFG3L2Q9Y4W6 797 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 SUPT16HQ9Y5B9 1047 aaKnown RBP9.71□□□□□ -0.86
RFC1-207ENST00000504554 ZHX2Q9Y6X8 837 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 SALL3Q9BXA9 1300 aa9.71□□□□□ -0.86
RFC1-207ENST00000504554 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 PRKAB2O43741 272 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 CTNND1O60716 968 aaKnown RBP9.7□□□□□ -0.86
RFC1-207ENST00000504554 FKTNO75072 461 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 IGHDP01880 384 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 CETPP11597 493 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 CAP2P40123 477 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 PLCD1P51178 756 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 HDAC1Q13547 482 aaPredicted RBP9.7□□□□□ -0.86
RFC1-207ENST00000504554 HIC1Q14526 733 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 PI4K2BQ8TCG2 481 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 SDR42E1Q8WUS8 393 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 ARMT1Q9H993 441 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 ECHDC1Q9NTX5 307 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 PI4KBQ9UBF8 816 aa9.7□□□□□ -0.86
RFC1-207ENST00000504554 HTTP42858 3142 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 A0A0G2JLL6 359 aaPredicted RBP9.69□□□□□ -0.86
RFC1-207ENST00000504554 CXCL11O14625 94 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 GDF11O95390 407 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 CYP2D6P10635 497 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 USP5P45974 858 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 PDE4DQ08499 809 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 MAP2K5Q13163 448 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 TAF1CQ15572 869 aaPredicted RBP9.69□□□□□ -0.86
RFC1-207ENST00000504554 PRRT2Q7Z6L0 340 aaPredicted RBP9.69□□□□□ -0.86
RFC1-207ENST00000504554 CTU1Q7Z7A3 348 aaKnown RBP9.69□□□□□ -0.86
RFC1-207ENST00000504554 CD99L2Q8TCZ2 262 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 ADGRA2Q96PE1 1338 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 PUS7LQ9H0K6 701 aaKnown RBP9.69□□□□□ -0.86
RFC1-207ENST00000504554 DHX36Q9H2U1 1008 aaKnown RBP9.69□□□□□ -0.86
RFC1-207ENST00000504554 PICK1Q9NRD5 415 aa9.69□□□□□ -0.86
RFC1-207ENST00000504554 BRCA2P51587 3418 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 TRIM75PA6NK02 468 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 PDHXO00330 501 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 MAP3K7O43318 606 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 MBD4O95243 580 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 CTGFP29279 349 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 IRX6P78412 446 aaPredicted RBP9.68□□□□□ -0.86
RFC1-207ENST00000504554 TREML2Q5T2D2 321 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 ANKRD23Q86SG2 305 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 FOXP4Q8IVH2 680 aaPredicted RBP9.68□□□□□ -0.86
RFC1-207ENST00000504554 ARHGAP39Q9C0H5 1083 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 ZFYVE28Q9HCC9 887 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 HERC5Q9UII4 1024 aaKnown RBP9.68□□□□□ -0.86
RFC1-207ENST00000504554 CDK5RAP2Q96SN8 1893 aa9.68□□□□□ -0.86
RFC1-207ENST00000504554 CYP2D7A0A087X1C5 515 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 CCDC85CA6NKD9 419 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 TLR2O60603 784 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 CYP2C8P10632 490 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 SHMT1P34896 483 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 SP3Q02447 781 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 GABPAQ06546 454 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 SPP2Q13103 211 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 UBE3CQ15386 1083 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 TMED8Q6PL24 325 aaPredicted RBP9.67□□□□□ -0.86
RFC1-207ENST00000504554 C17orf99Q6UX52 265 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 GADL1Q6ZQY3 521 aa9.67□□□□□ -0.86
RFC1-207ENST00000504554 NYAP1Q6ZVC0 841 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms