RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SKOR2Q2VWA4 1001 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 HDXQ7Z353 690 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 PRRT2Q7Z6L0 340 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 DHX38Q92620 1227 aaKnown RBP4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 ELMO3Q96BJ8 720 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 MIPEPQ99797 713 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 ADAMTS10Q9H324 1103 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 TRIT1Q9H3H1 467 aaKnown RBP4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 GCM1Q9NP62 436 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 ZSWIM5Q9P217 1185 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 CSADQ9Y600 493 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 SNCAIPQ9Y6H5 919 aa4.41□□□□□ -1.7
HMGB1P35-201ENST00000503360 H3BRB1 525 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 CELA3BP08861 270 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 ZGLP1P0C6A0 271 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 GSTT1P30711 240 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 ETV3P41162 512 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 ERVFC1P60507 584 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 CHRNEQ04844 493 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 GGNQ86UU5 652 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 SPPL2CQ8IUH8 684 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 GRIN3AQ8TCU5 1115 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 INTS4Q96HW7 963 aaKnown RBP4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 TUT1Q9H6E5 874 aaKnown RBP4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 CNOT11Q9UKZ1 510 aaKnown RBP4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 PCDHA4Q9UN74 947 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 AKAP2Q9Y2D5 859 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 KCTD3Q9Y597 815 aa4.4□□□□□ -1.71
HMGB1P35-201ENST00000503360 HK2P52789 917 aa4.39□□□□□ -1.71
HMGB1P35-201ENST00000503360 MPRIPQ6WCQ1 1025 aa4.39□□□□□ -1.71
HMGB1P35-201ENST00000503360 GPR62Q9BZJ7 368 aa4.39□□□□□ -1.71
HMGB1P35-201ENST00000503360 DUSP15Q9H1R2 295 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P35-201ENST00000503360 FBRSQ9HAH7 460 aa4.39□□□□□ -1.71
HMGB1P35-201ENST00000503360 GIPC1O14908 333 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 CBX7O95931 251 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 KCNA1Q09470 495 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 EFEMP1Q12805 493 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 NKG7Q16617 165 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 SPATS1Q496A3 300 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 MRPL41Q8IXM3 137 aaKnown RBP4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 RIN3Q8TB24 985 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 DACT3Q96B18 629 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 TEPSINQ96N21 525 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 PODXL2Q9NZ53 605 aa4.38□□□□□ -1.71
HMGB1P35-201ENST00000503360 INPP5AQ14642 412 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 TMEM132EQ6IEE7 984 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 LRFN4Q6PJG9 635 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 NXPE4Q6UWF7 544 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 ZNF605Q86T29 641 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 CREG2Q8IUH2 290 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 SP8Q8IXZ3 490 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 SIGLEC10Q96LC7 697 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 GPATCH2Q9NW75 528 aa4.37□□□□□ -1.71
HMGB1P35-201ENST00000503360 PATL2C9JE40 543 aaKnown RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 PAGE1O75459 146 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 TPP2P29144 1249 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 ETF1P62495 437 aaKnown RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 DUSP4Q13115 394 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 ZXDCQ2QGD7 858 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 PRAMEF13Q5VWM6 474 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 TSPYL5Q86VY4 417 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 ANKS4BQ8N8V4 417 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 TMC1Q8TDI8 760 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 FBF1Q8TES7 1133 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 SYTL4Q96C24 671 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 GZF1Q9H116 711 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 TMPRSS5Q9H3S3 457 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 LUC7LQ9NQ29 371 aaKnown RBP4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 MYRFQ9Y2G1 1151 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 ZNF281Q9Y2X9 895 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 IVNS1ABPQ9Y6Y0 642 aa4.36□□□□□ -1.71
HMGB1P35-201ENST00000503360 ZC3H12DA2A288 527 aaKnown RBP4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 PRAMEF27A3QJZ7 478 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 OR14I1A6ND48 311 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 OTOL1A6NHN0 477 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 TRHRP34981 398 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 CAP1Q01518 475 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 SLC6A19Q695T7 634 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 PI16Q6UXB8 463 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 SHISA4Q96DD7 197 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 PLPPR2Q96GM1 343 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 Q96M66 194 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 DUSP13Q9UII6 198 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 IRAK3Q9Y616 596 aa4.35□□□□□ -1.71
HMGB1P35-201ENST00000503360 SLC22A31A6NKX4 558 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 SERPINB4P48594 390 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 AFF3P51826 1226 aaKnown RBP4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 EGR3Q06889 387 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 DSC3Q14574 896 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 SSPNQ14714 243 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 ENOX2Q16206 610 aaKnown RBP4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 RASIP1Q5U651 963 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 PCNX4Q63HM2 1172 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 TPTE2Q6XPS3 522 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 FRMD5Q7Z6J6 570 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 TXNDC2Q86VQ3 553 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 DNAJB8Q8NHS0 232 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 LINC01599Q8WXQ3 324 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 GAL3ST3Q96A11 431 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms