RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SENP2Q9HC62 589 aa23.97■■□□□ 1.43
CDC42SE2-206ENST00000503291 STX8Q9UNK0 236 aa23.97■■□□□ 1.43
CDC42SE2-206ENST00000503291 TOMM70O94826 608 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 IREB2P48200 963 aaKnown RBP23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 MAP3K9P80192 1104 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 ANKRD1Q15327 319 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 DGKHQ86XP1 1220 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 CLEC10AQ8IUN9 316 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 KANSL2Q9H9L4 492 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 LIFRP42702 1097 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 SMC1BQ8NDV3 1235 aa23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.96■■□□□ 1.43
CDC42SE2-206ENST00000503291 GREB1LQ9C091 1923 aaPredicted RBP23.95■■□□□ 1.43
CDC42SE2-206ENST00000503291 CELF2O95319 508 aaKnown RBP23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 NOVP48745 357 aa23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 MAP3K11Q16584 847 aa23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 IFIT1BQ5T764 474 aaKnown RBP23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 NOL8Q76FK4 1167 aaKnown RBP23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 ARMC9Q7Z3E5 817 aa23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 SCYL3Q8IZE3 742 aa23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 TMTC2Q8N394 836 aa23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 GINM1Q9NU53 330 aa23.95■■□□□ 1.42
CDC42SE2-206ENST00000503291 ANKS1AQ92625 1134 aa23.94■■□□□ 1.42
CDC42SE2-206ENST00000503291 TTLL1O95922 423 aa23.94■■□□□ 1.42
CDC42SE2-206ENST00000503291 APOBRQ0VD83 1088 aa23.94■■□□□ 1.42
CDC42SE2-206ENST00000503291 RBM46Q8TBY0 533 aaKnown RBP23.94■■□□□ 1.42
CDC42SE2-206ENST00000503291 ICA1Q05084 483 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 CST9Q5W186 159 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 NFXL1Q6ZNB6 911 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 SGMS1Q86VZ5 419 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 SIAH1Q8IUQ4 282 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 PICK1Q9NRD5 415 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 CLIP2Q9UDT6 1046 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 UBE2Q2LH0YL09 131 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 EEF2P13639 858 aaKnown RBP23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 ATP2B2Q01814 1243 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 VGLL4Q14135 290 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 NOL9Q5SY16 702 aaKnown RBP23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 ANKRD13AQ8IZ07 590 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 SNX21Q969T3 373 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 TMEM47Q9BQJ4 181 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 GBA2Q9HCG7 927 aaPredicted RBP23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 NYAP2Q9P242 653 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 BRPF3Q9ULD4 1205 aa23.93■■□□□ 1.42
CDC42SE2-206ENST00000503291 ATAD5Q96QE3 1844 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 CCDC69A6NI79 296 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 MCM2P49736 904 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 FKBP1BP68106 108 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 PPP4R3BQ5MIZ7 849 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 CCDC84Q86UT8 332 aaPredicted RBP23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 C2orf69Q8N8R5 385 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 TPCN1Q9ULQ1 816 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 LIMCH1Q9UPQ0 1083 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 CSADQ9Y600 493 aa23.92■■□□□ 1.42
CDC42SE2-206ENST00000503291 PASKQ96RG2 1323 aa23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 EVCP57679 992 aa23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 USP17L5A8MUK1 530 aa23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 TOP1P11387 765 aaKnown RBP23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 PTPRAP18433 802 aa23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 LDLRAD1Q5T700 205 aa23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 KAT14Q9H8E8 782 aa23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 SNCAIPQ9Y6H5 919 aa23.91■■□□□ 1.42
CDC42SE2-206ENST00000503291 DOCK1Q14185 1865 aa23.9■■□□□ 1.42
CDC42SE2-206ENST00000503291 KLF18A0A0U1RQI7 1052 aa23.9■■□□□ 1.42
CDC42SE2-206ENST00000503291 MKL1Q969V6 931 aa23.9■■□□□ 1.42
CDC42SE2-206ENST00000503291 SLC12A7Q9Y666 1083 aa23.9■■□□□ 1.42
CDC42SE2-206ENST00000503291 ANP32AP39687 249 aaKnown RBP23.89■■□□□ 1.42
CDC42SE2-206ENST00000503291 CLMNQ96JQ2 1002 aa23.89■■□□□ 1.42
CDC42SE2-206ENST00000503291 NAP1L2Q9ULW6 460 aaPredicted RBP23.89■■□□□ 1.42
CDC42SE2-206ENST00000503291 A0A1W2PRG0 241 aa23.89■■□□□ 1.41
CDC42SE2-206ENST00000503291 APOA5Q6Q788 366 aa23.89■■□□□ 1.41
CDC42SE2-206ENST00000503291 LRRC47Q8N1G4 583 aaKnown RBP23.89■■□□□ 1.41
CDC42SE2-206ENST00000503291 PNMA1Q8ND90 353 aa23.89■■□□□ 1.41
CDC42SE2-206ENST00000503291 ACER1Q8TDN7 264 aa23.89■■□□□ 1.41
CDC42SE2-206ENST00000503291 ARHGEF10LQ9HCE6 1279 aa23.89■■□□□ 1.41
CDC42SE2-206ENST00000503291 TRPM7Q96QT4 1865 aa23.89■■□□□ 1.41
CDC42SE2-206ENST00000503291 PAPPA2Q9BXP8 1791 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 OTOFQ9HC10 1997 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 ECE1P42892 770 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 CATIPQ7Z7H3 387 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 ZNF654Q8IZM8 581 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 TBC1D2Q9BYX2 928 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 ZHX2Q9Y6X8 837 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 PDIA3P30101 505 aaKnown RBP23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 ME3Q16798 604 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 SYNE3Q6ZMZ3 975 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 ZNF274Q96GC6 653 aaPredicted RBP23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 MYL10Q9BUA6 226 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 ELP3Q9H9T3 547 aa23.88■■□□□ 1.41
CDC42SE2-206ENST00000503291 UNCXA6NJT0 531 aa23.87■■□□□ 1.41
CDC42SE2-206ENST00000503291 FSTL1Q12841 308 aa23.87■■□□□ 1.41
CDC42SE2-206ENST00000503291 RAB11FIP4Q86YS3 637 aa23.87■■□□□ 1.41
CDC42SE2-206ENST00000503291 HSCBQ8IWL3 235 aa23.87■■□□□ 1.41
CDC42SE2-206ENST00000503291 TMX2Q9Y320 296 aa23.87■■□□□ 1.41
CDC42SE2-206ENST00000503291 MYH4Q9Y623 1939 aa23.87■■□□□ 1.41
CDC42SE2-206ENST00000503291 LARGE1O95461 756 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 TROAPQ12815 778 aa23.86■■□□□ 1.41
CDC42SE2-206ENST00000503291 TMX3Q96JJ7 454 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms