RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 SLC9C1Q4G0N8 1177 aa29.78■■■□□ 2.36
TRIO-204ENST00000502816 SLC44A5Q8NCS7 719 aa29.78■■■□□ 2.36
TRIO-204ENST00000502816 DYNLL2Q96FJ2 89 aa29.78■■■□□ 2.36
TRIO-204ENST00000502816 ARPP21Q9UBL0 812 aaPredicted RBP29.78■■■□□ 2.36
TRIO-204ENST00000502816 BRCA2P51587 3418 aa29.77■■■□□ 2.36
TRIO-204ENST00000502816 CDK8P49336 464 aa29.77■■■□□ 2.36
TRIO-204ENST00000502816 SEPT2Q15019 361 aa29.77■■■□□ 2.36
TRIO-204ENST00000502816 TMEM179Q6ZVK1 233 aa29.77■■■□□ 2.36
TRIO-204ENST00000502816 TICAM2Q86XR7 235 aa29.77■■■□□ 2.36
TRIO-204ENST00000502816 ACER1Q8TDN7 264 aa29.77■■■□□ 2.36
TRIO-204ENST00000502816 CCDC17Q96LX7 622 aa29.77■■■□□ 2.36
TRIO-204ENST00000502816 P2RX7Q99572 595 aaKnown RBP29.77■■■□□ 2.36
TRIO-204ENST00000502816 MYPNQ86TC9 1320 aa29.76■■■□□ 2.36
TRIO-204ENST00000502816 DOCK3Q8IZD9 2030 aa29.76■■■□□ 2.36
TRIO-204ENST00000502816 SMIM22K7EJ46 135 aa29.76■■■□□ 2.35
TRIO-204ENST00000502816 GPAA1O43292 621 aa29.76■■■□□ 2.35
TRIO-204ENST00000502816 IGHDP01880 384 aa29.76■■■□□ 2.35
TRIO-204ENST00000502816 CYP2D7A0A087X1C5 515 aa29.75■■■□□ 2.35
TRIO-204ENST00000502816 IRX3P78415 501 aaPredicted RBP29.75■■■□□ 2.35
TRIO-204ENST00000502816 ZMYM1Q5SVZ6 1142 aa29.75■■■□□ 2.35
TRIO-204ENST00000502816 GTF3C2Q8WUA4 911 aaPredicted RBP29.75■■■□□ 2.35
TRIO-204ENST00000502816 M0R2C6 588 aa29.74■■■□□ 2.35
TRIO-204ENST00000502816 HERVK_113P62684 666 aa29.74■■■□□ 2.35
TRIO-204ENST00000502816 FSD1Q9BTV5 496 aa29.74■■■□□ 2.35
TRIO-204ENST00000502816 PATL2C9JE40 543 aaKnown RBP29.73■■■□□ 2.35
TRIO-204ENST00000502816 PRKCZQ05513 592 aa29.73■■■□□ 2.35
TRIO-204ENST00000502816 IRF5Q13568 498 aa29.73■■■□□ 2.35
TRIO-204ENST00000502816 EVI5LQ96CN4 794 aa29.73■■■□□ 2.35
TRIO-204ENST00000502816 FEZ1Q99689 392 aa29.73■■■□□ 2.35
TRIO-204ENST00000502816 GABRQQ9UN88 632 aa29.73■■■□□ 2.35
TRIO-204ENST00000502816 ROBO3Q96MS0 1386 aa29.73■■■□□ 2.35
TRIO-204ENST00000502816 A0A1W2PRG0 241 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L15C9J2P7 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L13C9JLJ4 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L11C9JVI0 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L18D6R9N7 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L22D6RA61 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L17D6RBQ6 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L19D6RCP7 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L20D6RJB6 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 AKR1B1P15121 316 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 USP17L24Q0WX57 530 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 CATSPERGQ6ZRH7 1159 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 SIAH1Q8IUQ4 282 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 RAET1EQ8TD07 263 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 EPB41L4AQ9HCS5 686 aaPredicted RBP29.72■■■□□ 2.35
TRIO-204ENST00000502816 RBPJLQ9UBG7 517 aa29.72■■■□□ 2.35
TRIO-204ENST00000502816 GREB1LQ9C091 1923 aaPredicted RBP29.72■■■□□ 2.35
TRIO-204ENST00000502816 KIAA0100Q14667 2235 aaKnown RBP29.71■■■□□ 2.35
TRIO-204ENST00000502816 MPHOSPH10O00566 681 aaKnown RBP29.71■■■□□ 2.35
TRIO-204ENST00000502816 ECM2O94769 699 aaPredicted RBP29.71■■■□□ 2.35
TRIO-204ENST00000502816 VCAM1P19320 739 aa29.71■■■□□ 2.35
TRIO-204ENST00000502816 POTEEQ6S8J3 1075 aa29.71■■■□□ 2.35
TRIO-204ENST00000502816 LBX2Q6XYB7 198 aa29.71■■■□□ 2.35
TRIO-204ENST00000502816 SH3TC2Q8TF17 1288 aa29.71■■■□□ 2.35
TRIO-204ENST00000502816 POTEFA5A3E0 1075 aa29.7■■■□□ 2.35
TRIO-204ENST00000502816 TNPO2O14787 897 aaKnown RBP29.7■■■□□ 2.35
TRIO-204ENST00000502816 GRK4P32298 578 aa29.7■■■□□ 2.35
TRIO-204ENST00000502816 NUCB1Q02818 461 aa29.7■■■□□ 2.35
TRIO-204ENST00000502816 PXYLP1Q8TE99 480 aa29.7■■■□□ 2.35
TRIO-204ENST00000502816 SEC62Q99442 399 aaKnown RBP29.7■■■□□ 2.35
TRIO-204ENST00000502816 LNPKQ9C0E8 428 aa29.7■■■□□ 2.35
TRIO-204ENST00000502816 TXNRD2Q9NNW7 524 aa29.7■■■□□ 2.35
TRIO-204ENST00000502816 FLT3LGP49771 235 aa29.69■■■□□ 2.34
TRIO-204ENST00000502816 ZYXQ15942 572 aaKnown RBP29.69■■■□□ 2.34
TRIO-204ENST00000502816 CHD1LQ86WJ1 897 aa29.69■■■□□ 2.34
TRIO-204ENST00000502816 IFNL3Q8IZI9 196 aa29.69■■■□□ 2.34
TRIO-204ENST00000502816 GPRC5AQ8NFJ5 357 aa29.69■■■□□ 2.34
TRIO-204ENST00000502816 COA7Q96BR5 231 aa29.69■■■□□ 2.34
TRIO-204ENST00000502816 OSBPL3Q9H4L5 887 aa29.69■■■□□ 2.34
TRIO-204ENST00000502816 TMX2Q9Y320 296 aa29.69■■■□□ 2.34
TRIO-204ENST00000502816 PLXNB2O15031 1838 aa29.68■■■□□ 2.34
TRIO-204ENST00000502816 SLAIN1Q8ND83 568 aa29.68■■■□□ 2.34
TRIO-204ENST00000502816 RLFQ13129 1914 aa29.67■■■□□ 2.34
TRIO-204ENST00000502816 TMEM106CQ9BVX2 250 aa29.67■■■□□ 2.34
TRIO-204ENST00000502816 GJD2Q9UKL4 321 aa29.67■■■□□ 2.34
TRIO-204ENST00000502816 ICA1Q05084 483 aa29.66■■■□□ 2.34
TRIO-204ENST00000502816 Q3C1V9 767 aa29.66■■■□□ 2.34
TRIO-204ENST00000502816 LPAR1Q92633 364 aa29.66■■■□□ 2.34
TRIO-204ENST00000502816 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.66■■■□□ 2.34
TRIO-204ENST00000502816 KANSL2Q9H9L4 492 aa29.66■■■□□ 2.34
TRIO-204ENST00000502816 ARHGEF10LQ9HCE6 1279 aa29.66■■■□□ 2.34
TRIO-204ENST00000502816 RABGAP1Q9Y3P9 1069 aa29.66■■■□□ 2.34
TRIO-204ENST00000502816 ERVK-9P63128 1117 aa29.65■■■□□ 2.34
TRIO-204ENST00000502816 ERVK-24P63145 666 aa29.65■■■□□ 2.34
TRIO-204ENST00000502816 B4GALNT3Q6L9W6 998 aa29.65■■■□□ 2.34
TRIO-204ENST00000502816 PLEKHM2Q8IWE5 1019 aa29.65■■■□□ 2.34
TRIO-204ENST00000502816 RPAP3Q9H6T3 665 aaPredicted RBP29.65■■■□□ 2.34
TRIO-204ENST00000502816 SH2D4AQ9H788 454 aa29.65■■■□□ 2.34
TRIO-204ENST00000502816 MKI67P46013 3256 aaKnown RBP29.64■■■□□ 2.34
TRIO-204ENST00000502816 MINDY4BA8MYZ0 360 aa29.64■■■□□ 2.34
TRIO-204ENST00000502816 ADCY3O60266 1144 aa29.64■■■□□ 2.34
TRIO-204ENST00000502816 RASA1P20936 1047 aa29.64■■■□□ 2.34
TRIO-204ENST00000502816 TDO2P48775 406 aa29.64■■■□□ 2.34
TRIO-204ENST00000502816 NACAP1Q9BZK3 213 aa29.64■■■□□ 2.34
TRIO-204ENST00000502816 HELLSQ9NRZ9 838 aa29.64■■■□□ 2.34
TRIO-204ENST00000502816 CNMDO75829 334 aa29.63■■■□□ 2.33
TRIO-204ENST00000502816 APPP05067 770 aa29.63■■■□□ 2.33
TRIO-204ENST00000502816 KIAA1755Q5JYT7 1200 aa29.63■■■□□ 2.33
TRIO-204ENST00000502816 VCPKMTQ9H867 229 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms