RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 KCNJ18B7U540 433 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 TCP1P17987 556 aaKnown RBP19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 KCNJ12Q14500 433 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 ZNF827Q17R98 1081 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 VWA3BQ502W6 1294 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 RNF17Q9BXT8 1623 aaKnown RBP19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 ATP11AP98196 1134 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 SETDB1Q15047 1291 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 CNNM4Q6P4Q7 775 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 PARP3Q9Y6F1 533 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 ZMYM6O95789 1325 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 CCDC84Q86UT8 332 aaPredicted RBP19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 XAGE2Q96GT9 111 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 TRIM7Q9C029 511 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 KCNJ14Q9UNX9 436 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 SPHKAPQ2M3C7 1700 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 KRT79Q5XKE5 535 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 CLIC6Q96NY7 704 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 SETDB2Q96T68 719 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 HYOU1Q9Y4L1 999 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 SLC9C1Q4G0N8 1177 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 NAP1L3Q99457 506 aaPredicted RBP19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 PRDM4Q9UKN5 801 aa19.2■□□□□ 0.66
HMGXB3-201ENST00000502717 SMIM23A6NLE4 172 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 MBD4O95243 580 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 CASP14P31944 242 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 SLC8A1P32418 973 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 ENOX1Q8TC92 643 aaKnown RBP19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 C6orf50Q9HD87 102 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 ZNF589Q86UQ0 364 aaPredicted RBP19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 PNMA8AQ86V59 439 aaPredicted RBP19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 ACSBG1Q96GR2 724 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 ABCB6Q9NP58 842 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 HDAC9Q9UKV0 1011 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 MAGEB6P1A0A0J9YX57 407 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 MORC3Q14149 939 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 PANX2Q96RD6 677 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 PLIN2Q99541 437 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 STX8Q9UNK0 236 aa19.19■□□□□ 0.66
HMGXB3-201ENST00000502717 NEURL1BA8MQ27 555 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 DNM2P50570 870 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 NAPAP54920 295 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 PSMB7Q99436 277 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 MYL10Q9BUA6 226 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 PPANQ9NQ55 473 aaKnown RBP19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.18■□□□□ 0.662e-7■■■■■ 65
HMGXB3-201ENST00000502717 NLRP1Q9C000 1473 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 MCTP2Q6DN12 878 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 MMS22LQ6ZRQ5 1243 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 RPAP1Q9BWH6 1393 aaPredicted RBP19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 H7C1D1 291 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 KCNJ6P48051 423 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 SV2BQ7L1I2 683 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 CACNA2D3Q8IZS8 1091 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 PAIP2Q9BPZ3 127 aaKnown RBP19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 UTP11Q9Y3A2 253 aaKnown RBP19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 V9GY48 417 aaPredicted RBP19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 ADD1P35611 737 aaKnown RBP19.18■□□□□ 0.66
HMGXB3-201ENST00000502717 ATP1A3P13637 1013 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 LMNTD2Q8IXW0 634 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 BAIAP2L1Q9UHR4 511 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 ATP5DP30049 168 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 ATP1A2P50993 1020 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 ABCA9Q8IUA7 1624 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 ACTN4O43707 911 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 TBCAO75347 108 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 RBL2Q08999 1139 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 RAPGEF1Q13905 1077 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 PIK3AP1Q6ZUJ8 805 aa19.17■□□□□ 0.66
HMGXB3-201ENST00000502717 ERMNQ8TAM6 284 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 COPRSQ9NQ92 184 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 GYS2P54840 703 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 EIF3CLB5ME19 914 aaKnown RBP19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 BAG3O95817 575 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 SLFN14P0C7P3 912 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 STAMQ92783 540 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 GSDMAQ96QA5 445 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 EIF3CQ99613 913 aaKnown RBP19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 NUCKS1Q9H1E3 243 aaKnown RBP19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 GNA11P29992 359 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 RNASE9P60153 205 aaKnown RBP19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 KIF23Q02241 960 aaPredicted RBP19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 CALCOCO2Q13137 446 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 CCDC152Q4G0S7 254 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 ZCCHC17Q9NP64 241 aaKnown RBP19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 KCNK9Q9NPC2 374 aa19.16■□□□□ 0.66
HMGXB3-201ENST00000502717 TADA2BQ86TJ2 420 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 BLZF1Q9H2G9 400 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 KLHL7Q8IXQ5 586 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 TSPY3P0CV98 308 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 TSPY8P0CW00 308 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 TOB2Q14106 344 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms