RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PTPRFP10586 1907 aa9.39□□□□□ -0.91
PDZRN3-212ENST00000498048 PHIPQ8WWQ0 1821 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 ELP1O95163 1332 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 MAP3K13O43283 966 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 RASA1P20936 1047 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 PLCD1P51178 756 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 UBE2HP62256 183 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 HDLBPQ00341 1268 aaKnown RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 TFAP4Q01664 338 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 NTRK3Q16288 839 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 DALRD3Q5D0E6 543 aaKnown RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 CDC42EP5Q6NZY7 148 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 FAM173BQ6P4H8 233 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 SPATA32Q96LK8 384 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 SCAND2PQ9GZW5 306 aaPredicted RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 TAOK3Q9H2K8 898 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 DDX4Q9NQI0 724 aaKnown RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 KCNQ5Q9NR82 932 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 ZNF277Q9NRM2 450 aaPredicted RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 USP40Q9NVE5 1235 aa9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 PPP1R1BQ9UD71 204 aaPredicted RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 COL11A1P12107 1806 aaPredicted RBP9.38□□□□□ -0.91
PDZRN3-212ENST00000498048 PAPPA2Q9BXP8 1791 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 GADD45BO75293 160 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 DEXIO95424 95 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 CDK8P49336 464 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 AKAP17AQ02040 695 aaKnown RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 GNL2Q13823 731 aaKnown RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 POTEHQ6S545 545 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 TMTC3Q6ZXV5 915 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 BRAPQ7Z569 592 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 ZNF467Q7Z7K2 595 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 TTC6Q86TZ1 520 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 ZNF444Q8N0Y2 327 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 FANCBQ8NB91 859 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 FBXO18Q8NFZ0 1043 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 UPF1Q92900 1129 aaKnown RBP eCLIP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 KIF12Q96FN5 646 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 ZNF396Q96N95 335 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 TMOD2Q9NZR1 351 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 SERPINA10Q9UK55 444 aa9.37□□□□□ -0.91
PDZRN3-212ENST00000498048 PSMD14O00487 310 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 PLEKHA8P1O95397 391 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 KIF5BP33176 963 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 KIF23Q02241 960 aaPredicted RBP9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 TROAPQ12815 778 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 NFIAQ12857 509 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 ZSCAN23Q3MJ62 389 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 CFAP100Q494V2 611 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 KRT40Q6A162 431 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 RCSD1Q6JBY9 416 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 APOBEC3HQ6NTF7 200 aaKnown RBP9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 VPS33BQ9H267 617 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 SERPINB13Q9UIV8 391 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 CFAP45Q9UL16 551 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 STX8Q9UNK0 236 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 PCDHAC2Q9Y5I4 1007 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 ATRNL1Q5VV63 1379 aa9.36□□□□□ -0.91
PDZRN3-212ENST00000498048 GOLGA6L3A6NEY3 463 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 KIF28PB7ZC32 967 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 STK25O00506 426 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 RAD17O75943 681 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 XBP1P17861 261 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 CACNB3P54284 484 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 GABPAQ06546 454 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 GRM4Q14833 912 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 SAFBQ15424 915 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 L1TD1Q5T7N2 865 aaKnown RBP9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 ATL3Q6DD88 541 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 DGKHQ86XP1 1220 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 CMTR1Q8N1G2 835 aaKnown RBP9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 CRACR2BQ8N4Y2 399 aaPredicted RBP9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 ZNF579Q8NAF0 562 aaKnown RBP9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 BICD2Q8TD16 824 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 LEO1Q8WVC0 666 aaPredicted RBP9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 SGIP1Q9BQI5 828 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 TRIM34Q9BYJ4 488 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 EHD4Q9H223 541 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 GJB4Q9NTQ9 266 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 TCP11L1Q9NUJ3 509 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
PDZRN3-212ENST00000498048 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms