RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 TROAPQ12815 778 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 C16orf45Q96MC5 204 aaPredicted RBP13.73□□□□□ -0.21
HCN3-204ENST00000496230 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 KCNF1Q9H3M0 494 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 KIAA1468Q9P260 1216 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 CCDC196A0A1B0GTZ2 297 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
HCN3-204ENST00000496230 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
HCN3-204ENST00000496230 POLR3EQ9NVU0 708 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
HCN3-204ENST00000496230 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
HCN3-204ENST00000496230 PKN1Q16512 942 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 STX1AQ16623 288 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 WDR66Q8TBY9 1149 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 TMX1Q9H3N1 280 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 GPCPD1Q9NPB8 672 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
HCN3-204ENST00000496230 SNAP25P60880 206 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
HCN3-204ENST00000496230 AMOTL1Q8IY63 956 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 CEP57L1Q8IYX8 460 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 TDRD7Q8NHU6 1098 aaKnown RBP13.72□□□□□ -0.21
HCN3-204ENST00000496230 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
HCN3-204ENST00000496230 SLC16A2P36021 539 aa13.71□□□□□ -0.21
HCN3-204ENST00000496230 IFNKQ9P0W0 207 aa13.71□□□□□ -0.21
HCN3-204ENST00000496230 ERCC3P19447 782 aa13.71□□□□□ -0.21
HCN3-204ENST00000496230 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
HCN3-204ENST00000496230 ZFPM1Q8IX07 1006 aa13.71□□□□□ -0.21
HCN3-204ENST00000496230 TMTC2Q8N394 836 aa13.71□□□□□ -0.21
HCN3-204ENST00000496230 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.21
HCN3-204ENST00000496230 PP2D1A8MPX8 630 aa13.71□□□□□ -0.22
HCN3-204ENST00000496230 NOLC1Q14978 699 aaKnown RBP eCLIP13.71□□□□□ -0.22
HCN3-204ENST00000496230 EYA3Q99504 573 aa13.71□□□□□ -0.22
HCN3-204ENST00000496230 MAP3K14Q99558 947 aa13.71□□□□□ -0.22
HCN3-204ENST00000496230 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.22
HCN3-204ENST00000496230 ANO10Q9NW15 660 aa13.71□□□□□ -0.22
HCN3-204ENST00000496230 TAL1P17542 331 aaPredicted RBP13.7□□□□□ -0.22
HCN3-204ENST00000496230 ZNF75DP51815 510 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 PTPAQ15257 358 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
HCN3-204ENST00000496230 GJA10Q969M2 543 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 DDX60Q8IY21 1712 aaKnown RBP13.7□□□□□ -0.22
HCN3-204ENST00000496230 NFIAQ12857 509 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 PTGDRQ13258 359 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 UVSSAQ2YD98 709 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 C12orf60Q5U649 245 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 RCSD1Q6JBY9 416 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 DEFB132Q7Z7B7 95 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 DHX40Q8IX18 779 aaKnown RBP13.7□□□□□ -0.22
HCN3-204ENST00000496230 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 LEMD3Q9Y2U8 911 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 PARP3Q9Y6F1 533 aa13.7□□□□□ -0.22
HCN3-204ENST00000496230 YEATS4O95619 227 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 XBP1P17861 261 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 GPIHBP1Q8IV16 184 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 WASF1Q92558 559 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 ATP8A2Q9NTI2 1148 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 USP40Q9NVE5 1235 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 BTAF1O14981 1849 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 ANKRD36CQ5JPF3 1778 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 CENPFP49454 3210 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 SERPINC1P01008 464 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 KRT2P35908 639 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 CDK8P49336 464 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 IQCB1Q15051 598 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 INF2Q27J81 1249 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 TMC6Q7Z403 805 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
HCN3-204ENST00000496230 CACTINQ8WUQ7 758 aaKnown RBP13.69□□□□□ -0.22
HCN3-204ENST00000496230 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 PRDM4Q9UKN5 801 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 MYH7P12883 1935 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
HCN3-204ENST00000496230 CMA1P23946 247 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 U2AF2P26368 475 aaKnown RBP eCLIP13.69□□□□□ -0.223e-9■■□□□ 14.1
HCN3-204ENST00000496230 EZH2Q15910 746 aaKnown RBP13.69□□□□□ -0.22
HCN3-204ENST00000496230 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 METTL16Q86W50 562 aaKnown RBP13.69□□□□□ -0.22
HCN3-204ENST00000496230 JMYQ8N9B5 988 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
HCN3-204ENST00000496230 DDX4Q9NQI0 724 aaKnown RBP13.69□□□□□ -0.22
HCN3-204ENST00000496230 ZBTB9Q96C00 473 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 XPO4Q9C0E2 1151 aaKnown RBP13.68□□□□□ -0.22
HCN3-204ENST00000496230 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
HCN3-204ENST00000496230 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
HCN3-204ENST00000496230 A0A087X0B3 334 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 CPLX3Q8WVH0 158 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 COA7Q96BR5 231 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
HCN3-204ENST00000496230 ATRNO75882 1429 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 PES1O00541 588 aaKnown RBP13.68□□□□□ -0.22
HCN3-204ENST00000496230 C21orf2O43822 256 aa13.68□□□□□ -0.22
HCN3-204ENST00000496230 CFAP100Q494V2 611 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms