RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 FILIP1Q7Z7B0 1213 aa16.97■□□□□ 0.31
CHTOP-206ENST00000495554 ATP8A2Q9NTI2 1148 aa16.97■□□□□ 0.31
CHTOP-206ENST00000495554 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
CHTOP-206ENST00000495554 HOOK1Q9UJC3 728 aaKnown RBP16.97■□□□□ 0.31
CHTOP-206ENST00000495554 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
CHTOP-206ENST00000495554 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
CHTOP-206ENST00000495554 PDCL3Q9H2J4 239 aa16.97■□□□□ 0.31
CHTOP-206ENST00000495554 FBXO2Q9UK22 296 aaPredicted RBP16.97■□□□□ 0.31
CHTOP-206ENST00000495554 PRPF3O43395 683 aaKnown RBP16.96■□□□□ 0.31
CHTOP-206ENST00000495554 ORC4O43929 436 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 FUT2Q10981 343 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 TROAPQ12815 778 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 PNOCQ13519 176 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
CHTOP-206ENST00000495554 OSBPL5Q9H0X9 879 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-206ENST00000495554 TMEM51Q9NW97 253 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 DDAH1O94760 285 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 CYP2D6P10635 497 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 TXNRD1Q16881 649 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 SPTY2D1Q68D10 685 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-206ENST00000495554 WDR66Q8TBY9 1149 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 MAP7D2Q96T17 732 aa16.96■□□□□ 0.31
CHTOP-206ENST00000495554 MKRN1Q9UHC7 482 aaKnown RBP16.96■□□□□ 0.31
CHTOP-206ENST00000495554 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.3
CHTOP-206ENST00000495554 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
CHTOP-206ENST00000495554 SKILP12757 684 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 ARID5BQ14865 1188 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 PKN1Q16512 942 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 SBK1Q52WX2 424 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 OXER1Q8TDS5 423 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 CABP5Q9NP86 173 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 PCDHB6Q9Y5E3 794 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 SMC2O95347 1197 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 ST5P78524 1137 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 ISM2Q6H9L7 571 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 NOL10Q9BSC4 688 aaKnown RBP16.95■□□□□ 0.3
CHTOP-206ENST00000495554 XPO4Q9C0E2 1151 aaKnown RBP16.95■□□□□ 0.3
CHTOP-206ENST00000495554 IFNKQ9P0W0 207 aa16.95■□□□□ 0.3
CHTOP-206ENST00000495554 ARPP21Q9UBL0 812 aaPredicted RBP16.95■□□□□ 0.3
CHTOP-206ENST00000495554 SRPRBQ9Y5M8 271 aaKnown RBP16.95■□□□□ 0.3
CHTOP-206ENST00000495554 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
CHTOP-206ENST00000495554 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 HOXA10P31260 410 aaPredicted RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 DHX8Q14562 1220 aaKnown RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 MTERF4Q7Z6M4 381 aaKnown RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 PHF20Q9BVI0 1012 aa16.94■□□□□ 0.3
CHTOP-206ENST00000495554 LDHBP07195 334 aaKnown RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 MYL5Q02045 173 aa16.94■□□□□ 0.3
CHTOP-206ENST00000495554 TMEM132AQ24JP5 1023 aa16.94■□□□□ 0.3
CHTOP-206ENST00000495554 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
CHTOP-206ENST00000495554 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
CHTOP-206ENST00000495554 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 C16orf45Q96MC5 204 aaPredicted RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 VPS54Q9P1Q0 977 aa16.94■□□□□ 0.3
CHTOP-206ENST00000495554 PCDHA5Q9Y5H7 936 aa16.94■□□□□ 0.3
CHTOP-206ENST00000495554 V9GY48 417 aaPredicted RBP16.94■□□□□ 0.3
CHTOP-206ENST00000495554 KRT2P35908 639 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
CHTOP-206ENST00000495554 DIXDC1Q155Q3 683 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 FOXP4Q8IVH2 680 aaPredicted RBP16.93■□□□□ 0.3
CHTOP-206ENST00000495554 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 MAST2Q6P0Q8 1798 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 MYO1BO43795 1136 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 BBOX1O75936 387 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 PLEKHA8P1O95397 391 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 USP17L8P0C7I0 530 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 CCZ1BP86790 482 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
CHTOP-206ENST00000495554 TPD52L1Q16890 204 aaPredicted RBP16.93■□□□□ 0.3
CHTOP-206ENST00000495554 TMTC3Q6ZXV5 915 aa16.93■□□□□ 0.3
CHTOP-206ENST00000495554 TRIM75PA6NK02 468 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 NMT2O60551 498 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 ATP2B4P23634 1241 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 LMOD1P29536 600 aaPredicted RBP16.92■□□□□ 0.3
CHTOP-206ENST00000495554 GRIN1Q05586 938 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 PDE4BQ07343 736 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 BRMS1Q9HCU9 246 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 POLLQ9UGP5 575 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 POLR2DO15514 142 aaKnown RBP16.92■□□□□ 0.3
CHTOP-206ENST00000495554 UFL1O94874 794 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 TNNT1P13805 278 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 POSTNQ15063 836 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 FAM47AQ5JRC9 791 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 KANK3Q6NY19 840 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 CCDC150Q8NCX0 1101 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 CTCFLQ8NI51 663 aaPredicted RBP16.92■□□□□ 0.3
CHTOP-206ENST00000495554 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
CHTOP-206ENST00000495554 HSD3B7Q9H2F3 369 aa16.92■□□□□ 0.3
CHTOP-206ENST00000495554 RIOK3O14730 519 aaKnown RBP16.91■□□□□ 0.3
CHTOP-206ENST00000495554 IL1R1P14778 569 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 NT5C2P49902 561 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 PPP4CP60510 307 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 FANCCQ00597 558 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
CHTOP-206ENST00000495554 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-206ENST00000495554 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms