RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RUSC1Q9BVN2 902 aa9.32□□□□□ -0.92
VIM-207ENST00000495528 BACH2Q9BYV9 841 aa9.32□□□□□ -0.92
VIM-207ENST00000495528 NRSN2Q9GZP1 204 aa9.32□□□□□ -0.92
VIM-207ENST00000495528 DHX57Q6P158 1386 aaKnown RBP9.32□□□□□ -0.92
VIM-207ENST00000495528 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 F6X3S4 739 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 F8W735 103 aaPredicted RBP9.31□□□□□ -0.92
VIM-207ENST00000495528 AP3B2Q13367 1082 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 PDE3AQ14432 1141 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 MBTPS1Q14703 1052 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 PLA2G4EQ3MJ16 856 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.31□□□□□ -0.92
VIM-207ENST00000495528 WFDC12Q8WWY7 111 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 KCNB2Q92953 911 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 AKTIPQ9H8T0 292 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 KIAA1522Q9P206 1035 aaPredicted RBP9.31□□□□□ -0.92
VIM-207ENST00000495528 SBNO1A3KN83 1393 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 USP31Q70CQ4 1352 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 EP400Q96L91 3159 aa9.31□□□□□ -0.92
VIM-207ENST00000495528 MARF1Q9Y4F3 1742 aaKnown RBP9.31□□□□□ -0.92
VIM-207ENST00000495528 NME2P22392 152 aa9.3□□□□□ -0.92
VIM-207ENST00000495528 NOS3P29474 1203 aa9.3□□□□□ -0.92
VIM-207ENST00000495528 ADGRE1Q14246 886 aa9.3□□□□□ -0.92
VIM-207ENST00000495528 SV2BQ7L1I2 683 aa9.3□□□□□ -0.92
VIM-207ENST00000495528 GRIN3AQ8TCU5 1115 aa9.3□□□□□ -0.92
VIM-207ENST00000495528 POGKQ9P215 609 aa9.3□□□□□ -0.92
VIM-207ENST00000495528 FMN2Q9NZ56 1722 aa9.3□□□□□ -0.92
VIM-207ENST00000495528 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
VIM-207ENST00000495528 ARHGEF10O15013 1369 aa9.29□□□□□ -0.92
VIM-207ENST00000495528 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.29□□□□□ -0.92
VIM-207ENST00000495528 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
VIM-207ENST00000495528 GSTP1P09211 210 aaKnown RBP9.29□□□□□ -0.92
VIM-207ENST00000495528 GLB1P16278 677 aa9.29□□□□□ -0.92
VIM-207ENST00000495528 ARNTP27540 789 aa9.29□□□□□ -0.92
VIM-207ENST00000495528 PCNX4Q63HM2 1172 aa9.29□□□□□ -0.92
VIM-207ENST00000495528 HIRIP3Q9BW71 556 aaPredicted RBP9.29□□□□□ -0.92
VIM-207ENST00000495528 BTG4Q9NY30 223 aa9.29□□□□□ -0.92
VIM-207ENST00000495528 USP32Q8NFA0 1604 aa9.29□□□□□ -0.92
VIM-207ENST00000495528 KNDC1Q76NI1 1749 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 RECKO95980 971 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 ITGB2P05107 769 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 BMP6P22004 513 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 ST13P50502 369 aaKnown RBP9.28□□□□□ -0.92
VIM-207ENST00000495528 RASIP1Q5U651 963 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 MAP1SQ66K74 1059 aaPredicted RBP9.28□□□□□ -0.92
VIM-207ENST00000495528 TXNRD3Q86VQ6 643 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 TMEM130Q8N3G9 435 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 RNF208Q9H0X6 261 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 SAMM50Q9Y512 469 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 KIF1AQ12756 1690 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 IFT172Q9UG01 1749 aa9.28□□□□□ -0.92
VIM-207ENST00000495528 LIG1P18858 919 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 EXOSC6Q5RKV6 272 aaKnown RBP9.27□□□□□ -0.93
VIM-207ENST00000495528 LDLRAD1Q5T700 205 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 NUTM2GQ5VZR2 741 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 TTBK2Q6IQ55 1244 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 EMILIN2Q9BXX0 1053 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 CCDC86Q9H6F5 360 aaKnown RBP9.27□□□□□ -0.93
VIM-207ENST00000495528 RAD18Q9NS91 495 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 PRR36Q9H6K5 1346 aa9.27□□□□□ -0.93
VIM-207ENST00000495528 BRWD3Q6RI45 1802 aa9.26□□□□□ -0.93
VIM-207ENST00000495528 GATA4P43694 442 aa9.26□□□□□ -0.93
VIM-207ENST00000495528 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
VIM-207ENST00000495528 PDZD3Q86UT5 571 aa9.26□□□□□ -0.93
VIM-207ENST00000495528 RGPD8O14715 1765 aaPredicted RBP9.25□□□□□ -0.93
VIM-207ENST00000495528 ANKARQ7Z5J8 1434 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 LIG3P49916 1009 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 AKAP4Q5JQC9 854 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 FDX2Q6P4F2 183 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 C12orf50Q8NA57 414 aaPredicted RBP9.25□□□□□ -0.93
VIM-207ENST00000495528 WDR89Q96FK6 387 aaPredicted RBP9.25□□□□□ -0.93
VIM-207ENST00000495528 MEGF10Q96KG7 1140 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
VIM-207ENST00000495528 TMPRSS13Q9BYE2 586 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 TLR6Q9Y2C9 796 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 SPATA31A5Q5VU36 1347 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 SPATA31A7Q8IWB4 1347 aa9.25□□□□□ -0.93
VIM-207ENST00000495528 GPRASP1Q5JY77 1395 aa9.24□□□□□ -0.93
VIM-207ENST00000495528 LMNB1P20700 586 aa9.24□□□□□ -0.93
VIM-207ENST00000495528 LLGL2Q6P1M3 1020 aa9.24□□□□□ -0.93
VIM-207ENST00000495528 NGDNQ8NEJ9 315 aaKnown RBP9.24□□□□□ -0.93
VIM-207ENST00000495528 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
VIM-207ENST00000495528 CYP4F12Q9HCS2 524 aa9.24□□□□□ -0.93
VIM-207ENST00000495528 DLC1Q96QB1 1528 aa9.24□□□□□ -0.93
VIM-207ENST00000495528 NWD2Q9ULI1 1742 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 SART1O43290 800 aaKnown RBP9.23□□□□□ -0.93
VIM-207ENST00000495528 ZNF862O60290 1169 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 DRD2P14416 443 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 VAMP1P23763 118 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 LRRC14Q15048 493 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 EZH2Q15910 746 aaKnown RBP9.23□□□□□ -0.93
VIM-207ENST00000495528 HP1BP3Q5SSJ5 553 aaPredicted RBP9.23□□□□□ -0.93
VIM-207ENST00000495528 UBL7Q96S82 380 aaPredicted RBP9.23□□□□□ -0.93
VIM-207ENST00000495528 WDR18Q9BV38 432 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 COPRSQ9NQ92 184 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 PRDM11Q9NQV5 511 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 GGT7Q9UJ14 662 aa9.23□□□□□ -0.93
VIM-207ENST00000495528 PCDHB5Q9Y5E4 795 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms