RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 TAF1CQ15572 869 aaPredicted RBP16.16■□□□□ 0.18
FDPS-219ENST00000495308 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
FDPS-219ENST00000495308 FEZ1Q99689 392 aa16.16■□□□□ 0.18
FDPS-219ENST00000495308 ZSWIM8A7E2V4 1837 aa16.16■□□□□ 0.18
FDPS-219ENST00000495308 SLC3A2P08195 630 aaKnown RBP16.15■□□□□ 0.18
FDPS-219ENST00000495308 BACE1P56817 501 aa16.15■□□□□ 0.18
FDPS-219ENST00000495308 PDE4BQ07343 736 aa16.15■□□□□ 0.18
FDPS-219ENST00000495308 FASTKD5Q7L8L6 764 aaKnown RBP16.15■□□□□ 0.18
FDPS-219ENST00000495308 ANKRD23Q86SG2 305 aa16.15■□□□□ 0.18
FDPS-219ENST00000495308 CCDC17Q96LX7 622 aa16.15■□□□□ 0.18
FDPS-219ENST00000495308 DSCC1Q9BVC3 393 aa16.15■□□□□ 0.18
FDPS-219ENST00000495308 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.15■□□□□ 0.189e-12■□□□□ 8.1
FDPS-219ENST00000495308 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
FDPS-219ENST00000495308 ANAPC4Q9UJX5 808 aa16.15■□□□□ 0.18
FDPS-219ENST00000495308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.15■□□□□ 0.18
FDPS-219ENST00000495308 A0A1W2PRG0 241 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 PTH1RQ03431 593 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 ICA1Q05084 483 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 SH3D19Q5HYK7 790 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 ZNF444Q8N0Y2 327 aaPredicted RBP16.14■□□□□ 0.17
FDPS-219ENST00000495308 PROCA1Q8NCQ7 364 aaPredicted RBP16.14■□□□□ 0.17
FDPS-219ENST00000495308 CFHR5Q9BXR6 569 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 ZNF287Q9HBT7 754 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 PARP14Q460N5 1801 aa16.14■□□□□ 0.17
FDPS-219ENST00000495308 ATP2B2Q01814 1243 aa16.13■□□□□ 0.17
FDPS-219ENST00000495308 SIAH1Q8IUQ4 282 aa16.13■□□□□ 0.17
FDPS-219ENST00000495308 TBC1D10CQ8IV04 446 aa16.13■□□□□ 0.17
FDPS-219ENST00000495308 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
FDPS-219ENST00000495308 ZCCHC17Q9NP64 241 aaKnown RBP16.13■□□□□ 0.17
FDPS-219ENST00000495308 EMILIN3Q9NT22 766 aa16.13■□□□□ 0.17
FDPS-219ENST00000495308 TMOD4Q9NZQ9 345 aa16.13■□□□□ 0.17
FDPS-219ENST00000495308 AGTPBP1Q9UPW5 1226 aa16.13■□□□□ 0.17
FDPS-219ENST00000495308 HTTP42858 3142 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 MGAMO43451 1857 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 C19orf81C9J6K1 198 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 ZNF213O14771 459 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 CDC45O75419 566 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 CYP2C8P10632 490 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 EEF2P13639 858 aaKnown RBP16.12■□□□□ 0.17
FDPS-219ENST00000495308 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
FDPS-219ENST00000495308 USP17L2Q6R6M4 530 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 ZFYVE28Q9HCC9 887 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 ARHGEF10LQ9HCE6 1279 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 PLIN4Q96Q06 1357 aa16.12■□□□□ 0.17
FDPS-219ENST00000495308 CENPFP49454 3210 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 IGKV6D-41A0A0C4DH26 115 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 GPR25O00155 361 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 ORC4O43929 436 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
FDPS-219ENST00000495308 TSPY3P0CV98 308 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 TSPY8P0CW00 308 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 TFAP4Q01664 338 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 ZNF296Q8WUU4 475 aaPredicted RBP16.11■□□□□ 0.17
FDPS-219ENST00000495308 PARK7Q99497 189 aaKnown RBP16.11■□□□□ 0.17
FDPS-219ENST00000495308 KIAA1683Q9H0B3 1180 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 KANSL2Q9H9L4 492 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 PRDM10Q9NQV6 1147 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 NEDD4P46934 1319 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 RLFQ13129 1914 aa16.11■□□□□ 0.17
FDPS-219ENST00000495308 TSPY2A6NKD2 308 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 USP14P54578 494 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 IMMTQ16891 758 aaKnown RBP16.1■□□□□ 0.17
FDPS-219ENST00000495308 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 NEDD1Q8NHV4 660 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 NKX2-3Q8TAU0 364 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 STAG1Q8WVM7 1258 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 C12orf42Q96LP6 360 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 CTNNA3Q9UI47 895 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 ADGRA2Q96PE1 1338 aa16.1■□□□□ 0.17
FDPS-219ENST00000495308 COL11A1P12107 1806 aaPredicted RBP16.1■□□□□ 0.17
FDPS-219ENST00000495308 NMT2O60551 498 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 TLR2O60603 784 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 FGRP09769 529 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 VCAM1P19320 739 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 COL13A1Q5TAT6 717 aaPredicted RBP16.09■□□□□ 0.17
FDPS-219ENST00000495308 LSG1Q9H089 658 aaKnown RBP16.09■□□□□ 0.17
FDPS-219ENST00000495308 ASCC2Q9H1I8 757 aaPredicted RBP16.09■□□□□ 0.17
FDPS-219ENST00000495308 ANO2Q9NQ90 1003 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 CPA4Q9UI42 421 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 PNMA3Q9UL41 463 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 SLC45A1Q9Y2W3 748 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 TMX2Q9Y320 296 aa16.09■□□□□ 0.17
FDPS-219ENST00000495308 RAD21O60216 631 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 PABPC4Q13310 644 aaKnown RBP eCLIP16.08■□□□□ 0.16
FDPS-219ENST00000495308 CASC1Q6TDU7 716 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 SPICE1Q8N0Z3 855 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 MTMR4Q9NYA4 1195 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
FDPS-219ENST00000495308 A0A0G2JMZ2 1700 aa16.08■□□□□ 0.16
FDPS-219ENST00000495308 FKTNO75072 461 aa16.07■□□□□ 0.16
FDPS-219ENST00000495308 ECM2O94769 699 aaPredicted RBP16.07■□□□□ 0.16
FDPS-219ENST00000495308 CYP21A2P08686 494 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms